Gene name: NSA1
Reference locus (S288C): YGL111W
Gene biotype: protein_coding
Description: Ribosome biogenesis protein NSA1; Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis
Top 10 interactors (score): NOP4 (0.999); NOG1 (0.999); NOC3 (0.999); SSF1 (0.999); EBP2 (0.999); NUG1 (0.999); ERB1 (0.999); NOP7 (0.999); RRP15 (0.999); NIP7 (0.999); TIF6 (0.999); CIC1 (0.999); MRT4 (0.999); YTM1 (0.999); SPB1 (0.999); NOP16 (0.999); NOP15 (0.999); RPF2 (0.999); RPF1 (0.999); NOP2 (0.999)
Homologues (species, bitscore): WDR74 (Homo sapiens, 70.1); Wdr74 (Mus musculus, 70.5); wdr74 (Danio rerio, 60.1); wdr74 (Xenopus tropicalis, 56.2); CG7845 (Drosophila melanogaster, 62.4); T06E6.1 (Caenorhabditis elegans, 57.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:303304-304695:+ | gene-YGL111W_AKU4011 | rna-NM_001180976.1_AKU4011 | cds-NP_011404.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:101050-102441:- | gene-YGL111W_BG1 | rna-NM_001180976.1_BG1 | cds-NP_011404.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:305463-306854:+ | gene-YGL111W_Bruggeman | rna-NM_001180976.1_Bruggeman | cds-NP_011404.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:300985-302376:+ | gene-YGL111W_CAT1 | rna-NM_001180976.1_CAT1 | cds-NP_011404.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:306630-308021:+ | gene-YGL111W_CBS1585 | rna-NM_001180976.1_CBS1585 | cds-NP_011404.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:300934-302325:+ | gene-YGL111W_CBS436 | rna-NM_001180976.1_CBS436 | cds-NP_011404.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:291323-292714:+ | gene-YGL111W_CBS6412 | rna-NM_001180976.1_CBS6412 | cds-NP_011404.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:300928-302319:+ | gene-YGL111W_CBS6413 | rna-NM_001180976.1_CBS6413 | cds-NP_011404.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:300165-301556:+ | gene-YGL111W_CENPK1137D | rna-NM_001180976.1_CENPK1137D | cds-NP_011404.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:292377-293768:+ | gene-YGL111W_EthanolRed | rna-NM_001180976.1_EthanolRed | cds-NP_011404.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:294932-296323:+ | gene-YGL111W_FaliES1 | rna-NM_001180976.1_FaliES1 | cds-NP_011404.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:5822-7213:- | gene-YGL111W_JAY291 | rna-NM_001180976.1_JAY291 | cds-NP_011404.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:302433-303824:+ | gene-YGL111W_MUCL30387 | rna-NM_001180976.1_MUCL30387 | cds-NP_011404.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:305525-306915:+ | gene-YGL111W_MUCL30388 | rna-NM_001180976.1_MUCL30388 | cds-NP_011404.1_MUCL30388 | 89.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:303143-304534:+ | gene-YGL111W_MUCL39482 | rna-NM_001180976.1_MUCL39482 | cds-NP_011404.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:306423-307814:+ | gene-YGL111W_MUCL42920 | rna-NM_001180976.1_MUCL42920 | cds-NP_011404.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:299978-301369:+ | gene-YGL111W_NCIM3186 | rna-NM_001180976.1_NCIM3186 | cds-NP_011404.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:294633-296024:+ | gene-YGL111W_NCYC1407 | rna-NM_001180976.1_NCYC1407 | cds-NP_011404.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:296018-297409:+ | gene-YGL111W_PE2H3 | rna-NM_001180976.1_PE2H3 | cds-NP_011404.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:301016-302407:+ | gene-YGL111W_PE2H4 | rna-NM_001180976.1_PE2H4 | cds-NP_011404.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:299978-301369:+ | gene-YGL111W_S288C | rna-NM_001180976.1_S288C | cds-NP_011404.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:44766-46157:+ | gene-YGL111W_SA1 | rna-NM_001180976.1_SA1 | cds-NP_011404.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:295144-296535:+ | gene-YGL111W_ThermosaccDry | rna-NM_001180976.1_ThermosaccDry | cds-NP_011404.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:404741-406132:+ | gene-YGL111W_VR1 | rna-NM_001180976.1_VR1 | cds-NP_011404.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:292541-293932:+ | gene-YGL111W_ZTW1 | rna-NM_001180976.1_ZTW1 | cds-NP_011404.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:298960-300351:+ | gene-YGL111W_Sparadoxus | rna-NM_001180976.1_Sparadoxus | cds-NP_011404.1_Sparadoxus | 86.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |