Gene name: NRT1
Reference locus (S288C): YOR071C
Gene biotype: protein_coding
Description: Nucleobase:cation symporter-1, ncs1 family; High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; major transporter for 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine) uptake; shares sequence similarity with Thi7p and Thi72p; proposed to be involved in 5-fluorocytosine sensitivity; Belongs to the purine-cytosine permease (2.A.39) family
Top 10 interactors (score): TNA1 (0.707); NRK1 (0.695); TPN1 (0.682); THI3 (0.627); FCY21 (0.622); FUN26 (0.619); QNS1 (0.614); THI22 (0.609); URH1 (0.595); FCY2 (0.578); FUN19 (0.571); FCY22 (0.569); NPY1 (0.536); PNP1 (0.525); DIA3 (0.485); THI11 (0.482); NCS2 (0.477); SRP40 (0.454); BNA1 (0.451); THI7 (0.44)
Homologues (species, bitscore): NCS1 (Arabidopsis thaliana, 122.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:443814-445610:- | gene-YOR071C_AKU4011 | rna-NM_001183490.1_AKU4011 | cds-NP_014714.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:134088-135886:+ | gene-YOR071C_BG1 | rna-NM_001183490.1_BG1 | cds-NP_014714.1_BG1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:446529-448325:- | gene-YOR071C_Bruggeman | rna-NM_001183490.1_Bruggeman | cds-NP_014714.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:445284-447080:- | gene-YOR071C_CAT1 | rna-NM_001183490.1_CAT1 | cds-NP_014714.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:438534-440330:- | gene-YOR071C_CBS1585 | rna-NM_001183490.1_CBS1585 | cds-NP_014714.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:442813-444609:- | gene-YOR071C_CBS436 | rna-NM_001183490.1_CBS436 | cds-NP_014714.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:437824-439620:- | gene-YOR071C_CBS6412 | rna-NM_001183490.1_CBS6412 | cds-NP_014714.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:445141-446937:- | gene-YOR071C_CBS6413 | rna-NM_001183490.1_CBS6413 | cds-NP_014714.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:459462-461258:- | gene-YOR071C_CENPK1137D | rna-NM_001183490.1_CENPK1137D | cds-NP_014714.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:440525-442321:- | gene-YOR071C_EthanolRed | rna-NM_001183490.1_EthanolRed | cds-NP_014714.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:443854-445650:- | gene-YOR071C_FaliES1 | rna-NM_001183490.1_FaliES1 | cds-NP_014714.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000216.1:1-1331:- | gene-YOR071C_JAY291 | rna-NM_001183490.1_JAY291 | cds-NP_014714.1_JAY291 | 73.5 | 74.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:451311-453108:- | gene-YOR071C_MUCL30387 | rna-NM_001183490.1_MUCL30387 | cds-NP_014714.1_MUCL30387 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:455721-457516:- | gene-YOR071C_MUCL30388 | rna-NM_001183490.1_MUCL30388 | cds-NP_014714.1_MUCL30388 | 91.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:446002-448047:- | gene-YOR071C_MUCL39482 | rna-NM_001183490.1_MUCL39482 | cds-NP_014714.1_MUCL39482 | 87.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:461134-463585:- | gene-YOR071C_MUCL42920 | rna-NM_001183490.1_MUCL42920 | cds-NP_014714.1_MUCL42920 | 73.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:459369-461165:- | gene-YOR071C_NCIM3186 | rna-NM_001183490.1_NCIM3186 | cds-NP_014714.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:452920-454716:- | gene-YOR071C_NCYC1407 | rna-NM_001183490.1_NCYC1407 | cds-NP_014714.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:451515-453311:- | gene-YOR071C_PE2H3 | rna-NM_001183490.1_PE2H3 | cds-NP_014714.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:461896-463692:- | gene-YOR071C_PE2H4 | rna-NM_001183490.1_PE2H4 | cds-NP_014714.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:459480-461276:- | gene-YOR071C_S288C | rna-NM_001183490.1_S288C | cds-NP_014714.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000091.1:26370-28166:+ | gene-YOR071C_SA1 | rna-NM_001183490.1_SA1 | cds-NP_014714.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:443010-444806:- | gene-YOR071C_ThermosaccDry | rna-NM_001183490.1_ThermosaccDry | cds-NP_014714.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:444500-446298:- | gene-YOR071C_VR1 | rna-NM_001183490.1_VR1 | cds-NP_014714.1_VR1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:177010-178806:- | gene-YOR071C_ZTW1 | rna-NM_001183490.1_ZTW1 | cds-NP_014714.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:449033-450829:- | gene-YOR071C_Sparadoxus | rna-NM_001183490.1_Sparadoxus | cds-NP_014714.1_Sparadoxus | 91.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |