Gene name: NRP1
Reference locus (S288C): YDL167C
Gene biotype: protein_coding
Description: Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose deprivation; predicted to be involved in ribosome biogenesis
Top 10 interactors (score): RRB1 (0.957); RPA135 (0.946); BMS1 (0.925); DBP3 (0.919); SYO1 (0.917); NOG1 (0.912); PUF6 (0.91); NOG2 (0.905); ARX1 (0.904); RSA4 (0.9); SPB1 (0.89); PWP2 (0.89); YTM1 (0.887); BFR2 (0.88); UTP5 (0.872); PWP1 (0.871); UTP25 (0.869); KRE33 (0.868); NOP14 (0.847); UTP8 (0.846)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:145412-147571:- | gene-YDL167C_AKU4011 | rna-NM_001180227.1_AKU4011 | cds-NP_010114.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:402159-404318:+ | gene-YDL167C_BG1 | rna-NM_001180227.1_BG1 | cds-NP_010114.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:161475-163637:- | gene-YDL167C_Bruggeman | rna-NM_001180227.1_Bruggeman | cds-NP_010114.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:159783-161942:- | gene-YDL167C_CAT1 | rna-NM_001180227.1_CAT1 | cds-NP_010114.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:143448-145607:- | gene-YDL167C_CBS1585 | rna-NM_001180227.1_CBS1585 | cds-NP_010114.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:160408-162567:- | gene-YDL167C_CBS436 | rna-NM_001180227.1_CBS436 | cds-NP_010114.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:143063-145222:- | gene-YDL167C_CBS6412 | rna-NM_001180227.1_CBS6412 | cds-NP_010114.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:161874-164033:- | gene-YDL167C_CBS6413 | rna-NM_001180227.1_CBS6413 | cds-NP_010114.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:159667-161829:- | gene-YDL167C_CENPK1137D | rna-NM_001180227.1_CENPK1137D | cds-NP_010114.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:156874-159033:- | gene-YDL167C_EthanolRed | rna-NM_001180227.1_EthanolRed | cds-NP_010114.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:162200-164359:- | gene-YDL167C_FaliES1 | rna-NM_001180227.1_FaliES1 | cds-NP_010114.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000032.1:55204-57363:+ | gene-YDL167C_JAY291 | rna-NM_001180227.1_JAY291 | cds-NP_010114.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:159770-161932:- | gene-YDL167C_MUCL30387 | rna-NM_001180227.1_MUCL30387 | cds-NP_010114.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:151419-153581:- | gene-YDL167C_MUCL30388 | rna-NM_001180227.1_MUCL30388 | cds-NP_010114.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:144591-146750:- | gene-YDL167C_MUCL39482 | rna-NM_001180227.1_MUCL39482 | cds-NP_010114.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000307.1:22611-24782:+ | gene-YDL167C_MUCL42920 | rna-NM_001180227.1_MUCL42920 | cds-NP_010114.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:160918-163077:- | gene-YDL167C_NCIM3186 | rna-NM_001180227.1_NCIM3186 | cds-NP_010114.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:144531-146690:- | gene-YDL167C_NCYC1407 | rna-NM_001180227.1_NCYC1407 | cds-NP_010114.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:151772-153934:- | gene-YDL167C_PE2H3 | rna-NM_001180227.1_PE2H3 | cds-NP_010114.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:151776-153938:- | gene-YDL167C_PE2H4 | rna-NM_001180227.1_PE2H4 | cds-NP_010114.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:160995-163154:- | gene-YDL167C_S288C | rna-NM_001180227.1_S288C | cds-NP_010114.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:26545-28707:- | gene-YDL167C_SA1 | rna-NM_001180227.1_SA1 | cds-NP_010114.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:161960-164119:- | gene-YDL167C_ThermosaccDry | rna-NM_001180227.1_ThermosaccDry | cds-NP_010114.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:162543-164705:- | gene-YDL167C_VR1 | rna-NM_001180227.1_VR1 | cds-NP_010114.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:160088-162250:- | gene-YDL167C_ZTW1 | rna-NM_001180227.1_ZTW1 | cds-NP_010114.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:162234-164351:- | gene-YDL167C_Sparadoxus | rna-NM_001180227.1_Sparadoxus | cds-NP_010114.1_Sparadoxus | 88.4 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |