Gene name: NRE1
Reference locus (S288C): YIR035C
Gene biotype: protein_coding
Description: Uncharacterized oxidoreductase YIR035C; Putative cytoplasmic short-chain dehydrogenase/reductase
Top 10 interactors (score): YSC83 (0.848); SPO24 (0.762); FOL2 (0.734); ATG41 (0.697); CSL4 (0.677); ERV2 (0.664); DFG5 (0.66); FUM1 (0.639); IDP1 (0.636); IDH2 (0.634); MDH1 (0.626); COX9 (0.613); ERG3 (0.611); DFR1 (0.596); CDC123 (0.574); YDL114W (0.55); YHL018W (0.53); LYS1 (0.527); GLO1 (0.503); YJR112W-A (0.499)
Homologues (species, bitscore): SPR (Homo sapiens, 82.8); Hsd17b14 (Mus musculus, 89.0); hsd17b14 (Danio rerio, 80.9); MGC79752 (Xenopus tropicalis, 79.7); CG31549 (Drosophila melanogaster, 95.5); ZK829.1 (Caenorhabditis elegans, 76.6); HSD3 (Arabidopsis thaliana, 82.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:419255-420019:- | gene-YIR035C_AKU4011 | rna-NM_001179557.3_AKU4011 | cds-NP_012301.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:6816-7580:+ | gene-YIR035C_BG1 | rna-NM_001179557.3_BG1 | cds-NP_012301.3_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:425449-426213:- | gene-YIR035C_Bruggeman | rna-NM_001179557.3_Bruggeman | cds-NP_012301.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:410406-411170:- | gene-YIR035C_CAT1 | rna-NM_001179557.3_CAT1 | cds-NP_012301.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:420210-420974:- | gene-YIR035C_CBS1585 | rna-NM_001179557.3_CBS1585 | cds-NP_012301.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:412179-412943:- | gene-YIR035C_CBS436 | rna-NM_001179557.3_CBS436 | cds-NP_012301.3_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:118713-119477:- | gene-YIR035C_CBS6412 | rna-NM_001179557.3_CBS6412 | cds-NP_012301.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:411311-412075:- | gene-YIR035C_CBS6413 | rna-NM_001179557.3_CBS6413 | cds-NP_012301.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:412685-413449:- | gene-YIR035C_CENPK1137D | rna-NM_001179557.3_CENPK1137D | cds-NP_012301.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:402172-402936:- | gene-YIR035C_EthanolRed | rna-NM_001179557.3_EthanolRed | cds-NP_012301.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:422000-422764:- | gene-YIR035C_FaliES1 | rna-NM_001179557.3_FaliES1 | cds-NP_012301.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:11335-12099:+ | gene-YIR035C_JAY291 | rna-NM_001179557.3_JAY291 | cds-NP_012301.3_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:426202-426966:- | gene-YIR035C_MUCL30387 | rna-NM_001179557.3_MUCL30387 | cds-NP_012301.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:420820-421584:- | gene-YIR035C_MUCL30388 | rna-NM_001179557.3_MUCL30388 | cds-NP_012301.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:420357-421121:- | gene-YIR035C_MUCL39482 | rna-NM_001179557.3_MUCL39482 | cds-NP_012301.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:426664-427428:- | gene-YIR035C_MUCL42920 | rna-NM_001179557.3_MUCL42920 | cds-NP_012301.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:421026-421790:- | gene-YIR035C_NCIM3186 | rna-NM_001179557.3_NCIM3186 | cds-NP_012301.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:424118-424882:- | gene-YIR035C_NCYC1407 | rna-NM_001179557.3_NCYC1407 | cds-NP_012301.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:415037-415801:- | gene-YIR035C_PE2H3 | rna-NM_001179557.3_PE2H3 | cds-NP_012301.3_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:409743-410507:- | gene-YIR035C_PE2H4 | rna-NM_001179557.3_PE2H4 | cds-NP_012301.3_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:421026-421790:- | gene-YIR035C_S288C | rna-NM_001179557.3_S288C | cds-NP_012301.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:7059-7823:+ | gene-YIR035C_SA1 | rna-NM_001179557.3_SA1 | cds-NP_012301.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:418865-419629:- | gene-YIR035C_ThermosaccDry | rna-NM_001179557.3_ThermosaccDry | cds-NP_012301.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:416274-417038:- | gene-YIR035C_VR1 | rna-NM_001179557.3_VR1 | cds-NP_012301.3_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:28110-28874:- | gene-YIR035C_ZTW1 | rna-NM_001179557.3_ZTW1 | cds-NP_012301.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:416549-417313:- | gene-YIR035C_Sparadoxus | rna-NM_001179557.3_Sparadoxus | cds-NP_012301.3_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |