Gene name: NPL6
Reference locus (S288C): YMR091C
Gene biotype: protein_coding
Description: Chromatin structure-remodeling complex subunit RSC7; Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to form a module important for a broad range of RSC functions
Top 10 interactors (score): RSC2 (0.999); RSC3 (0.999); HTL1 (0.999); RSC4 (0.999); RTT102 (0.999); ARP7 (0.999); RSC6 (0.999); RSC9 (0.999); STH1 (0.999); RSC58 (0.999); RSC8 (0.999); ARP9 (0.999); LDB7 (0.998); RSC30 (0.998); SFH1 (0.998); RSC1 (0.998); ISW1 (0.938); SNF5 (0.822); TAF14 (0.775); SWP82 (0.727)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:487995-489302:- | gene-YMR091C_AKU4011 | rna-NM_001182591.1_AKU4011 | cds-NP_013809.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:53708-55015:+ | gene-YMR091C_BG1 | rna-NM_001182591.1_BG1 | cds-NP_013809.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:430423-431730:- | gene-YMR091C_Bruggeman | rna-NM_001182591.1_Bruggeman | cds-NP_013809.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:430746-432053:- | gene-YMR091C_CAT1 | rna-NM_001182591.1_CAT1 | cds-NP_013809.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:420938-422245:- | gene-YMR091C_CBS1585 | rna-NM_001182591.1_CBS1585 | cds-NP_013809.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:426259-427569:- | gene-YMR091C_CBS436 | rna-NM_001182591.1_CBS436 | cds-NP_013809.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:534034-535341:- | gene-YMR091C_CBS6412 | rna-NM_001182591.1_CBS6412 | cds-NP_013809.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:420195-421502:- | gene-YMR091C_CBS6413 | rna-NM_001182591.1_CBS6413 | cds-NP_013809.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:444162-445472:- | gene-YMR091C_CENPK1137D | rna-NM_001182591.1_CENPK1137D | cds-NP_013809.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:420829-422136:- | gene-YMR091C_EthanolRed | rna-NM_001182591.1_EthanolRed | cds-NP_013809.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:423995-425302:- | gene-YMR091C_FaliES1 | rna-NM_001182591.1_FaliES1 | cds-NP_013809.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:11912-13219:+ | gene-YMR091C_JAY291 | rna-NM_001182591.1_JAY291 | cds-NP_013809.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:427374-428661:- | gene-YMR091C_MUCL30387 | rna-NM_001182591.1_MUCL30387 | cds-NP_013809.1_MUCL30387 | 98.0 | 98.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:431337-432647:- | gene-YMR091C_MUCL30388 | rna-NM_001182591.1_MUCL30388 | cds-NP_013809.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:421247-422554:- | gene-YMR091C_MUCL39482 | rna-NM_001182591.1_MUCL39482 | cds-NP_013809.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:427912-429219:- | gene-YMR091C_MUCL42920 | rna-NM_001182591.1_MUCL42920 | cds-NP_013809.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:450012-451319:- | gene-YMR091C_NCIM3186 | rna-NM_001182591.1_NCIM3186 | cds-NP_013809.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:421140-422447:- | gene-YMR091C_NCYC1407 | rna-NM_001182591.1_NCYC1407 | cds-NP_013809.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:426860-428167:- | gene-YMR091C_PE2H3 | rna-NM_001182591.1_PE2H3 | cds-NP_013809.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:432955-434262:- | gene-YMR091C_PE2H4 | rna-NM_001182591.1_PE2H4 | cds-NP_013809.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:450058-451365:- | gene-YMR091C_S288C | rna-NM_001182591.1_S288C | cds-NP_013809.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:98802-100109:+ | gene-YMR091C_SA1 | rna-NM_001182591.1_SA1 | cds-NP_013809.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:421798-423105:- | gene-YMR091C_ThermosaccDry | rna-NM_001182591.1_ThermosaccDry | cds-NP_013809.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:433446-434753:- | gene-YMR091C_VR1 | rna-NM_001182591.1_VR1 | cds-NP_013809.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:398068-399375:- | gene-YMR091C_ZTW1 | rna-NM_001182591.1_ZTW1 | cds-NP_013809.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:434524-435834:- | gene-YMR091C_Sparadoxus | rna-NM_001182591.1_Sparadoxus | cds-NP_013809.1_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |