Gene name: NOP8
Reference locus (S288C): YOL144W
Gene biotype: protein_coding
Description: 60S ribosome subunit biogenesis protein NOP8; Nucleolar protein required for 60S ribosomal subunit biogenesis
Top 10 interactors (score): DBP6 (0.986); RSA3 (0.983); URB1 (0.981); NIP7 (0.98); URB2 (0.957); UTP14 (0.942); DBP3 (0.942); DBP9 (0.927); DHR2 (0.916); NOP4 (0.898); KRI1 (0.891); LCP5 (0.887); EBP2 (0.883); ENP1 (0.882); DBP7 (0.875); ENP2 (0.861); NOP58 (0.86); RPF2 (0.86); SFT2 (0.852); PWP1 (0.852)
Homologues (species, bitscore): nol8 (Xenopus tropicalis, 59.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:41747-43198:+ | gene-YOL144W_AKU4011 | rna-NM_001183398.1_AKU4011 | cds-NP_014497.1_AKU4011 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:7382-8854:+ | gene-YOL144W_BG1 | rna-NM_001183398.1_BG1 | cds-NP_014497.1_BG1 | 96.9 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:43049-44503:+ | gene-YOL144W_Bruggeman | rna-NM_001183398.1_Bruggeman | cds-NP_014497.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:41746-43449:+ | gene-YOL144W_CAT1 | rna-NM_001183398.1_CAT1 | cds-NP_014497.1_CAT1 | 84.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:36214-37692:+ | gene-YOL144W_CBS1585 | rna-NM_001183398.1_CBS1585 | cds-NP_014497.1_CBS1585 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:42072-43547:+ | gene-YOL144W_CBS436 | rna-NM_001183398.1_CBS436 | cds-NP_014497.1_CBS436 | 97.3 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:36116-37567:+ | gene-YOL144W_CBS6412 | rna-NM_001183398.1_CBS6412 | cds-NP_014497.1_CBS6412 | 99.5 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:42562-44013:+ | gene-YOL144W_CBS6413 | rna-NM_001183398.1_CBS6413 | cds-NP_014497.1_CBS6413 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:52996-54450:+ | gene-YOL144W_CENPK1137D | rna-NM_001183398.1_CENPK1137D | cds-NP_014497.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:40027-41478:+ | gene-YOL144W_EthanolRed | rna-NM_001183398.1_EthanolRed | cds-NP_014497.1_EthanolRed | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:42050-43501:+ | gene-YOL144W_FaliES1 | rna-NM_001183398.1_FaliES1 | cds-NP_014497.1_FaliES1 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000329.1:39046-40518:- | gene-YOL144W_JAY291 | rna-NM_001183398.1_JAY291 | cds-NP_014497.1_JAY291 | 97.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:47670-49124:+ | gene-YOL144W_MUCL30387 | rna-NM_001183398.1_MUCL30387 | cds-NP_014497.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:50680-52134:+ | gene-YOL144W_MUCL30388 | rna-NM_001183398.1_MUCL30388 | cds-NP_014497.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:44144-45619:+ | gene-YOL144W_MUCL39482 | rna-NM_001183398.1_MUCL39482 | cds-NP_014497.1_MUCL39482 | 97.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:60075-61529:+ | gene-YOL144W_MUCL42920 | rna-NM_001183398.1_MUCL42920 | cds-NP_014497.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:52987-54441:+ | gene-YOL144W_NCIM3186 | rna-NM_001183398.1_NCIM3186 | cds-NP_014497.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:50225-51676:+ | gene-YOL144W_NCYC1407 | rna-NM_001183398.1_NCYC1407 | cds-NP_014497.1_NCYC1407 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:28621-30093:+ | gene-YOL144W_PE2H3 | rna-NM_001183398.1_PE2H3 | cds-NP_014497.1_PE2H3 | 97.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:45569-47041:+ | gene-YOL144W_PE2H4 | rna-NM_001183398.1_PE2H4 | cds-NP_014497.1_PE2H4 | 97.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:53098-54552:+ | gene-YOL144W_S288C | rna-NM_001183398.1_S288C | cds-NP_014497.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:26480-27955:+ | gene-YOL144W_SA1 | rna-NM_001183398.1_SA1 | cds-NP_014497.1_SA1 | 97.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:41193-42644:+ | gene-YOL144W_ThermosaccDry | rna-NM_001183398.1_ThermosaccDry | cds-NP_014497.1_ThermosaccDry | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:41843-43315:+ | gene-YOL144W_VR1 | rna-NM_001183398.1_VR1 | cds-NP_014497.1_VR1 | 96.9 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:40949-42400:+ | gene-YOL144W_ZTW1 | rna-NM_001183398.1_ZTW1 | cds-NP_014497.1_ZTW1 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:43461-44909:+ | gene-YOL144W_Sparadoxus | rna-NM_001183398.1_Sparadoxus | cds-NP_014497.1_Sparadoxus | 86.5 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |