Gene name: NOP7
Reference locus (S288C): YGR103W
Gene biotype: protein_coding
Description: Mrna-binding ribosome synthesis protein nop7; Pescadillo homolog; Component of several different pre-ribosomal particles; forms a complex with Ytm1p and Erb1p that is required for maturation of the large ribosomal subunit; required for exit from G0 and the initiation of cell proliferation
Top 10 interactors (score): RRP5 (0.999); NOP4 (0.999); NOG1 (0.999); TIF6 (0.999); CIC1 (0.999); MAK21 (0.999); MPP10 (0.999); MDN1 (0.999); KRE33 (0.999); RLP7 (0.999); DBP10 (0.999); BUD20 (0.999); NOP14 (0.999); SDA1 (0.999); RPL3 (0.999); UTP21 (0.999); NMD3 (0.999); BMS1 (0.999); DBP3 (0.999); PUF6 (0.999)
Homologues (species, bitscore): PES1 (Homo sapiens, 422.5); Pes1 (Mus musculus, 422.9); pes (Danio rerio, 436.0); PES1 (Xenopus tropicalis, 354.0); CG4364 (Drosophila melanogaster, 352.4); lpd-7 (Caenorhabditis elegans, 352.8); AT5G14520 (Arabidopsis thaliana, 336.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:679599-681416:+ | gene-YGR103W_AKU4011 | rna-NM_001181232.1_AKU4011 | cds-NP_011617.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:115458-117275:+ | gene-YGR103W_BG1 | rna-NM_001181232.1_BG1 | cds-NP_011617.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:681789-683606:+ | gene-YGR103W_Bruggeman | rna-NM_001181232.1_Bruggeman | cds-NP_011617.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:679978-681795:+ | gene-YGR103W_CAT1 | rna-NM_001181232.1_CAT1 | cds-NP_011617.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:680567-682384:+ | gene-YGR103W_CBS1585 | rna-NM_001181232.1_CBS1585 | cds-NP_011617.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:682220-684037:+ | gene-YGR103W_CBS436 | rna-NM_001181232.1_CBS436 | cds-NP_011617.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:672271-674088:+ | gene-YGR103W_CBS6412 | rna-NM_001181232.1_CBS6412 | cds-NP_011617.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:677204-679021:+ | gene-YGR103W_CBS6413 | rna-NM_001181232.1_CBS6413 | cds-NP_011617.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:695092-696909:+ | gene-YGR103W_CENPK1137D | rna-NM_001181232.1_CENPK1137D | cds-NP_011617.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:667189-669006:+ | gene-YGR103W_EthanolRed | rna-NM_001181232.1_EthanolRed | cds-NP_011617.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:670997-672814:+ | gene-YGR103W_FaliES1 | rna-NM_001181232.1_FaliES1 | cds-NP_011617.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000396.1:3741-5558:- | gene-YGR103W_JAY291 | rna-NM_001181232.1_JAY291 | cds-NP_011617.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:678778-680595:+ | gene-YGR103W_MUCL30387 | rna-NM_001181232.1_MUCL30387 | cds-NP_011617.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:681589-683406:+ | gene-YGR103W_MUCL30388 | rna-NM_001181232.1_MUCL30388 | cds-NP_011617.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:676298-678115:+ | gene-YGR103W_MUCL39482 | rna-NM_001181232.1_MUCL39482 | cds-NP_011617.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:686601-688418:+ | gene-YGR103W_MUCL42920 | rna-NM_001181232.1_MUCL42920 | cds-NP_011617.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:695417-697234:+ | gene-YGR103W_NCIM3186 | rna-NM_001181232.1_NCIM3186 | cds-NP_011617.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:670987-672804:+ | gene-YGR103W_NCYC1407 | rna-NM_001181232.1_NCYC1407 | cds-NP_011617.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:673668-675485:+ | gene-YGR103W_PE2H3 | rna-NM_001181232.1_PE2H3 | cds-NP_011617.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:678787-680604:+ | gene-YGR103W_PE2H4 | rna-NM_001181232.1_PE2H4 | cds-NP_011617.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:695417-697234:+ | gene-YGR103W_S288C | rna-NM_001181232.1_S288C | cds-NP_011617.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:122026-123843:+ | gene-YGR103W_SA1 | rna-NM_001181232.1_SA1 | cds-NP_011617.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:691366-693183:+ | gene-YGR103W_ThermosaccDry | rna-NM_001181232.1_ThermosaccDry | cds-NP_011617.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:787856-789673:+ | gene-YGR103W_VR1 | rna-NM_001181232.1_VR1 | cds-NP_011617.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:145614-147431:+ | gene-YGR103W_ZTW1 | rna-NM_001181232.1_ZTW1 | cds-NP_011617.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:681382-683196:+ | gene-YGR103W_Sparadoxus | rna-NM_001181232.1_Sparadoxus | cds-NP_011617.1_Sparadoxus | 91.4 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |