Gene name: NOP19
Reference locus (S288C): YGR251W
Gene biotype: protein_coding
Description: Nucleolar protein 19; Ribosome biogenesis factor; nucleolar protein associated with pre-rRNA components of the 90S preribosome, required for cleavage of pre-rRNA at A0, A1 and A2 sites; interacts with RNA helicase Dhr2p and RNA helicase-like protein Utp25p; required for incorporation of Utp25p into preribosomes
Top 10 interactors (score): UTP22 (0.999); DHR2 (0.999); UTP13 (0.999); UTP18 (0.997); RRP36 (0.997); SQS1 (0.992); CKA1 (0.992); CKA2 (0.991); CKB1 (0.991); PWP2 (0.977); TSR1 (0.972); RRP5 (0.963); BFR2 (0.962); NOP6 (0.959); UTP4 (0.959); UTP9 (0.956); ECM16 (0.955); ENP2 (0.954); BUD22 (0.953); ENP1 (0.953)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:961066-961656:+ | gene-YGR251W_AKU4011 | rna-NM_001181380.3_AKU4011 | cds-NP_011767.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:241236-241826:+ | gene-YGR251W_BG1 | rna-NM_001181380.3_BG1 | cds-NP_011767.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:969585-970175:+ | gene-YGR251W_Bruggeman | rna-NM_001181380.3_Bruggeman | cds-NP_011767.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:968521-969111:+ | gene-YGR251W_CAT1 | rna-NM_001181380.3_CAT1 | cds-NP_011767.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:963937-964527:+ | gene-YGR251W_CBS1585 | rna-NM_001181380.3_CBS1585 | cds-NP_011767.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:967567-968157:+ | gene-YGR251W_CBS436 | rna-NM_001181380.3_CBS436 | cds-NP_011767.3_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:954826-955416:+ | gene-YGR251W_CBS6412 | rna-NM_001181380.3_CBS6412 | cds-NP_011767.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:960881-961471:+ | gene-YGR251W_CBS6413 | rna-NM_001181380.3_CBS6413 | cds-NP_011767.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:995321-995911:+ | gene-YGR251W_CENPK1137D | rna-NM_001181380.3_CENPK1137D | cds-NP_011767.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:948918-949508:+ | gene-YGR251W_EthanolRed | rna-NM_001181380.3_EthanolRed | cds-NP_011767.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:953724-954314:+ | gene-YGR251W_FaliES1 | rna-NM_001181380.3_FaliES1 | cds-NP_011767.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:75997-76587:- | gene-YGR251W_JAY291 | rna-NM_001181380.3_JAY291 | cds-NP_011767.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:967319-967909:+ | gene-YGR251W_MUCL30387 | rna-NM_001181380.3_MUCL30387 | cds-NP_011767.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:965451-966041:+ | gene-YGR251W_MUCL30388 | rna-NM_001181380.3_MUCL30388 | cds-NP_011767.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:959042-959632:+ | gene-YGR251W_MUCL39482 | rna-NM_001181380.3_MUCL39482 | cds-NP_011767.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:976915-977505:+ | gene-YGR251W_MUCL42920 | rna-NM_001181380.3_MUCL42920 | cds-NP_011767.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:995639-996229:+ | gene-YGR251W_NCIM3186 | rna-NM_001181380.3_NCIM3186 | cds-NP_011767.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:954671-955261:+ | gene-YGR251W_NCYC1407 | rna-NM_001181380.3_NCYC1407 | cds-NP_011767.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:979862-980452:+ | gene-YGR251W_PE2H3 | rna-NM_001181380.3_PE2H3 | cds-NP_011767.3_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:984701-985291:+ | gene-YGR251W_PE2H4 | rna-NM_001181380.3_PE2H4 | cds-NP_011767.3_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:995639-996229:+ | gene-YGR251W_S288C | rna-NM_001181380.3_S288C | cds-NP_011767.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:5188-5778:- | gene-YGR251W_SA1 | rna-NM_001181380.3_SA1 | cds-NP_011767.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:974244-974834:+ | gene-YGR251W_ThermosaccDry | rna-NM_001181380.3_ThermosaccDry | cds-NP_011767.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1080023-1080613:+ | gene-YGR251W_VR1 | rna-NM_001181380.3_VR1 | cds-NP_011767.3_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:275654-276244:+ | gene-YGR251W_ZTW1 | rna-NM_001181380.3_ZTW1 | cds-NP_011767.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:966294-966884:+ | gene-YGR251W_Sparadoxus | rna-NM_001181380.3_Sparadoxus | cds-NP_011767.3_Sparadoxus | 88.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |