Gene name: NOG2
Reference locus (S288C): YNR053C
Gene biotype: protein_coding
Description: Nucleolar GTP-binding protein 2; Putative GTPase; associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2; Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily
Top 10 interactors (score): MRT4 (0.999); CGR1 (0.999); NIP7 (0.999); IPI3 (0.999); NOP7 (0.999); RPL25 (0.999); ARX1 (0.999); ERB1 (0.999); NUG1 (0.999); RLP24 (0.999); DRS1 (0.999); HAS1 (0.999); NSA2 (0.999); NOP2 (0.999); RRS1 (0.999); IPI1 (0.999); RPF2 (0.999); NOP15 (0.999); SPB1 (0.999); YTM1 (0.999)
Homologues (species, bitscore): GNL2 (Homo sapiens, 510.4); Gnl2 (Mus musculus, 512.3); gnl2 (Danio rerio, 521.5); gnl2 (Xenopus tropicalis, 513.8); Ns2 (Drosophila melanogaster, 476.5); ngp-1 (Caenorhabditis elegans, 490.0); AtNug2 (Arabidopsis thaliana, 469.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:228355-230349:+ | gene-YNR053C_AKU4011 | rna-NM_001183230.1_AKU4011 | cds-NP_014451.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:612709-614697:- | gene-YNR053C_BG1 | rna-NM_001183230.1_BG1 | cds-NP_014451.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:722425-724417:- | gene-YNR053C_Bruggeman | rna-NM_001183230.1_Bruggeman | cds-NP_014451.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:756460-758448:- | gene-YNR053C_CAT1 | rna-NM_001183230.1_CAT1 | cds-NP_014451.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:710688-712684:- | gene-YNR053C_CBS1585 | rna-NM_001183230.1_CBS1585 | cds-NP_014451.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:772200-774188:- | gene-YNR053C_CBS436 | rna-NM_001183230.1_CBS436 | cds-NP_014451.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:699667-701666:- | gene-YNR053C_CBS6412 | rna-NM_001183230.1_CBS6412 | cds-NP_014451.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:701351-703347:- | gene-YNR053C_CBS6413 | rna-NM_001183230.1_CBS6413 | cds-NP_014451.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:714841-716828:- | gene-YNR053C_CENPK1137D | rna-NM_001183230.1_CENPK1137D | cds-NP_014451.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:706328-708325:- | gene-YNR053C_EthanolRed | rna-NM_001183230.1_EthanolRed | cds-NP_014451.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:697531-699517:- | gene-YNR053C_FaliES1 | rna-NM_001183230.1_FaliES1 | cds-NP_014451.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:3146-5138:+ | gene-YNR053C_JAY291 | rna-NM_001183230.1_JAY291 | cds-NP_014451.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:720353-722345:- | gene-YNR053C_MUCL30387 | rna-NM_001183230.1_MUCL30387 | cds-NP_014451.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:761410-763402:- | gene-YNR053C_MUCL30388 | rna-NM_001183230.1_MUCL30388 | cds-NP_014451.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:702157-704150:- | gene-YNR053C_MUCL39482 | rna-NM_001183230.1_MUCL39482 | cds-NP_014451.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:706824-708817:- | gene-YNR053C_MUCL42920 | rna-NM_001183230.1_MUCL42920 | cds-NP_014451.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:721089-723081:- | gene-YNR053C_NCIM3186 | rna-NM_001183230.1_NCIM3186 | cds-NP_014451.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:704676-706666:- | gene-YNR053C_NCYC1407 | rna-NM_001183230.1_NCYC1407 | cds-NP_014451.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:705539-707532:- | gene-YNR053C_PE2H3 | rna-NM_001183230.1_PE2H3 | cds-NP_014451.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:706941-708934:- | gene-YNR053C_PE2H4 | rna-NM_001183230.1_PE2H4 | cds-NP_014451.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:721120-723112:- | gene-YNR053C_S288C | rna-NM_001183230.1_S288C | cds-NP_014451.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:3212-5203:+ | gene-YNR053C_SA1 | rna-NM_001183230.1_SA1 | cds-NP_014451.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:697868-699860:- | gene-YNR053C_ThermosaccDry | rna-NM_001183230.1_ThermosaccDry | cds-NP_014451.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:740001-741994:- | gene-YNR053C_VR1 | rna-NM_001183230.1_VR1 | cds-NP_014451.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:607636-609626:- | gene-YNR053C_ZTW1 | rna-NM_001183230.1_ZTW1 | cds-NP_014451.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:712104-714075:- | gene-YNR053C_Sparadoxus | rna-NM_001183230.1_Sparadoxus | cds-NP_014451.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |