Gene name: NOC3
Reference locus (S288C): YLR002C
Gene biotype: protein_coding
Description: Nucleolar complex-associated protein 3; Subunit of a nuclear complex with Noc2p and pre-replicative complexes; the Noc2p-Noc3p complex binds to 66S ribosomal precursors to mediate their maturation and intranuclear transport; binds to chromatin at active replication origins, and is required for pre-RC formation and maintenance during DNA replication licensing
Top 10 interactors (score): MAK16 (0.999); RLP24 (0.999); DRS1 (0.999); RRP1 (0.999); EBP2 (0.999); NUG1 (0.999); ERB1 (0.999); NOP7 (0.999); NIP7 (0.999); MRT4 (0.999); BRX1 (0.999); NOC2 (0.999); RLP7 (0.999); CIC1 (0.999); NOP4 (0.999); NOG1 (0.999); MAK21 (0.999); RRP12 (0.999); NSA1 (0.999); HAS1 (0.999)
Homologues (species, bitscore): NOC3L (Homo sapiens, 228.8); Noc3l (Mus musculus, 225.3); noc3l (Danio rerio, 239.6); noc3l (Xenopus tropicalis, 203.0); CG1234 (Drosophila melanogaster, 164.1); C37H5.5 (Caenorhabditis elegans, 144.4); AT1G79150 (Arabidopsis thaliana, 154.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:142328-144319:- | gene-YLR002C_AKU4011 | rna-NM_001181889.1_AKU4011 | cds-NP_013102.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:105532-107523:- | gene-YLR002C_BG1 | rna-NM_001181889.1_BG1 | cds-NP_013102.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:152694-154685:- | gene-YLR002C_Bruggeman | rna-NM_001181889.1_Bruggeman | cds-NP_013102.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:153013-155004:- | gene-YLR002C_CAT1 | rna-NM_001181889.1_CAT1 | cds-NP_013102.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:149927-151918:- | gene-YLR002C_CBS1585 | rna-NM_001181889.1_CBS1585 | cds-NP_013102.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:140546-142537:- | gene-YLR002C_CBS436 | rna-NM_001181889.1_CBS436 | cds-NP_013102.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:148699-150690:- | gene-YLR002C_CBS6412 | rna-NM_001181889.1_CBS6412 | cds-NP_013102.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:150193-152184:- | gene-YLR002C_CBS6413 | rna-NM_001181889.1_CBS6413 | cds-NP_013102.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:139612-141603:- | gene-YLR002C_CENPK1137D | rna-NM_001181889.1_CENPK1137D | cds-NP_013102.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:142349-144340:- | gene-YLR002C_EthanolRed | rna-NM_001181889.1_EthanolRed | cds-NP_013102.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:141920-143911:- | gene-YLR002C_FaliES1 | rna-NM_001181889.1_FaliES1 | cds-NP_013102.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000083.1:11690-13681:+ | gene-YLR002C_JAY291 | rna-NM_001181889.1_JAY291 | cds-NP_013102.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:150050-152041:- | gene-YLR002C_MUCL30387 | rna-NM_001181889.1_MUCL30387 | cds-NP_013102.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:155747-157738:- | gene-YLR002C_MUCL30388 | rna-NM_001181889.1_MUCL30388 | cds-NP_013102.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:150398-152389:- | gene-YLR002C_MUCL39482 | rna-NM_001181889.1_MUCL39482 | cds-NP_013102.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:150320-152311:- | gene-YLR002C_MUCL42920 | rna-NM_001181889.1_MUCL42920 | cds-NP_013102.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:154317-156308:- | gene-YLR002C_NCIM3186 | rna-NM_001181889.1_NCIM3186 | cds-NP_013102.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:142001-143992:- | gene-YLR002C_NCYC1407 | rna-NM_001181889.1_NCYC1407 | cds-NP_013102.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:148349-150340:- | gene-YLR002C_PE2H3 | rna-NM_001181889.1_PE2H3 | cds-NP_013102.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:148090-150081:- | gene-YLR002C_PE2H4 | rna-NM_001181889.1_PE2H4 | cds-NP_013102.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:154343-156334:- | gene-YLR002C_S288C | rna-NM_001181889.1_S288C | cds-NP_013102.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000062.1:57541-59532:- | gene-YLR002C_SA1 | rna-NM_001181889.1_SA1 | cds-NP_013102.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:142423-144414:- | gene-YLR002C_ThermosaccDry | rna-NM_001181889.1_ThermosaccDry | cds-NP_013102.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:155795-157786:- | gene-YLR002C_VR1 | rna-NM_001181889.1_VR1 | cds-NP_013102.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:141751-143742:- | gene-YLR002C_ZTW1 | rna-NM_001181889.1_ZTW1 | cds-NP_013102.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:150243-152234:- | gene-YLR002C_Sparadoxus | rna-NM_001181889.1_Sparadoxus | cds-NP_013102.1_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |