Gene name: NOC2
Reference locus (S288C): YOR206W
Gene biotype: protein_coding
Description: Nucleolar complex protein 2; Protein involved in ribosome biogenesis; forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes; forms a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit
Top 10 interactors (score): RRB1 (0.999); CBF5 (0.999); BRX1 (0.999); MAK16 (0.999); DBP3 (0.999); DBP9 (0.999); PUF6 (0.999); RRP5 (0.999); MAK21 (0.999); NOP4 (0.999); NOG1 (0.999); CIC1 (0.999); KRE33 (0.999); UTP22 (0.999); RLP7 (0.999); NOP14 (0.999); DBP10 (0.999); UTP10 (0.999); NMD3 (0.999); UTP21 (0.999)
Homologues (species, bitscore): NOC2L (Homo sapiens, 311.2); Noc2l (Mus musculus, 304.3); noc2l (Danio rerio, 325.1); NOC2L (Xenopus tropicalis, 298.5); CG9246 (Drosophila melanogaster, 245.4); pro-2 (Caenorhabditis elegans, 197.6); AT2G18220 (Arabidopsis thaliana, 243.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:718294-720426:+ | gene-YOR206W_AKU4011 | rna-NM_001183625.3_AKU4011 | cds-NP_014849.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:120333-122465:+ | gene-YOR206W_BG1 | rna-NM_001183625.3_BG1 | cds-NP_014849.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:703129-705261:+ | gene-YOR206W_Bruggeman | rna-NM_001183625.3_Bruggeman | cds-NP_014849.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:704407-706539:+ | gene-YOR206W_CAT1 | rna-NM_001183625.3_CAT1 | cds-NP_014849.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:701281-703413:+ | gene-YOR206W_CBS1585 | rna-NM_001183625.3_CBS1585 | cds-NP_014849.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:699972-702104:+ | gene-YOR206W_CBS436 | rna-NM_001183625.3_CBS436 | cds-NP_014849.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:698399-700531:+ | gene-YOR206W_CBS6412 | rna-NM_001183625.3_CBS6412 | cds-NP_014849.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:707038-709170:+ | gene-YOR206W_CBS6413 | rna-NM_001183625.3_CBS6413 | cds-NP_014849.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:727276-729408:+ | gene-YOR206W_CENPK1137D | rna-NM_001183625.3_CENPK1137D | cds-NP_014849.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:694424-696556:+ | gene-YOR206W_EthanolRed | rna-NM_001183625.3_EthanolRed | cds-NP_014849.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:699821-701953:+ | gene-YOR206W_FaliES1 | rna-NM_001183625.3_FaliES1 | cds-NP_014849.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:124795-126927:- | gene-YOR206W_JAY291 | rna-NM_001183625.3_JAY291 | cds-NP_014849.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:707091-709223:+ | gene-YOR206W_MUCL30387 | rna-NM_001183625.3_MUCL30387 | cds-NP_014849.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:714508-716640:+ | gene-YOR206W_MUCL30388 | rna-NM_001183625.3_MUCL30388 | cds-NP_014849.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:708610-710742:+ | gene-YOR206W_MUCL39482 | rna-NM_001183625.3_MUCL39482 | cds-NP_014849.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:718194-720326:+ | gene-YOR206W_MUCL42920 | rna-NM_001183625.3_MUCL42920 | cds-NP_014849.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:727401-729533:+ | gene-YOR206W_NCIM3186 | rna-NM_001183625.3_NCIM3186 | cds-NP_014849.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:708708-710840:+ | gene-YOR206W_NCYC1407 | rna-NM_001183625.3_NCYC1407 | cds-NP_014849.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:708106-710238:+ | gene-YOR206W_PE2H3 | rna-NM_001183625.3_PE2H3 | cds-NP_014849.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:718483-720615:+ | gene-YOR206W_PE2H4 | rna-NM_001183625.3_PE2H4 | cds-NP_014849.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:727512-729644:+ | gene-YOR206W_S288C | rna-NM_001183625.3_S288C | cds-NP_014849.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:137513-139645:+ | gene-YOR206W_SA1 | rna-NM_001183625.3_SA1 | cds-NP_014849.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:699006-701138:+ | gene-YOR206W_ThermosaccDry | rna-NM_001183625.3_ThermosaccDry | cds-NP_014849.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:762547-764679:+ | gene-YOR206W_VR1 | rna-NM_001183625.3_VR1 | cds-NP_014849.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:431918-434050:+ | gene-YOR206W_ZTW1 | rna-NM_001183625.3_ZTW1 | cds-NP_014849.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:704907-707030:+ | gene-YOR206W_Sparadoxus | rna-NM_001183625.3_Sparadoxus | cds-NP_014849.3_Sparadoxus | 90.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |