Gene name: NNF1
Reference locus (S288C): YJR112W
Gene biotype: protein_coding
Description: Kinetochore-associated protein NNF1; Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for accurate chromosome segregation; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)
Top 10 interactors (score): DSN1 (0.999); NSL1 (0.999); MTW1 (0.999); AME1 (0.97); OKP1 (0.94); NUF2 (0.923); SPC105 (0.905); MCM21 (0.904); NDC80 (0.899); SPC25 (0.884); CTF19 (0.872); CSE4 (0.867); CNN1 (0.854); KAR3 (0.814); DUO1 (0.813); CHL4 (0.813); MIF2 (0.796); SPC24 (0.793); ASK1 (0.76); DAD2 (0.745)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:608545-609150:+ | gene-YJR112W_AKU4011 | rna-NM_001181770.3_AKU4011 | cds-NP_012646.3_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:64505-65110:- | gene-YJR112W_BG1 | rna-NM_001181770.3_BG1 | cds-NP_012646.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:624274-624879:+ | gene-YJR112W_Bruggeman | rna-NM_001181770.3_Bruggeman | cds-NP_012646.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:628025-628630:+ | gene-YJR112W_CAT1 | rna-NM_001181770.3_CAT1 | cds-NP_012646.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:620599-621204:+ | gene-YJR112W_CBS1585 | rna-NM_001181770.3_CBS1585 | cds-NP_012646.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:639468-640073:+ | gene-YJR112W_CBS436 | rna-NM_001181770.3_CBS436 | cds-NP_012646.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:607363-607968:+ | gene-YJR112W_CBS6412 | rna-NM_001181770.3_CBS6412 | cds-NP_012646.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:610019-610624:+ | gene-YJR112W_CBS6413 | rna-NM_001181770.3_CBS6413 | cds-NP_012646.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:619347-619952:+ | gene-YJR112W_CENPK1137D | rna-NM_001181770.3_CENPK1137D | cds-NP_012646.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:612964-613569:+ | gene-YJR112W_EthanolRed | rna-NM_001181770.3_EthanolRed | cds-NP_012646.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:624430-625035:+ | gene-YJR112W_FaliES1 | rna-NM_001181770.3_FaliES1 | cds-NP_012646.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:64111-64716:- | gene-YJR112W_JAY291 | rna-NM_001181770.3_JAY291 | cds-NP_012646.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:623100-623705:+ | gene-YJR112W_MUCL30387 | rna-NM_001181770.3_MUCL30387 | cds-NP_012646.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:620788-621393:+ | gene-YJR112W_MUCL30388 | rna-NM_001181770.3_MUCL30388 | cds-NP_012646.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:614069-614674:+ | gene-YJR112W_MUCL39482 | rna-NM_001181770.3_MUCL39482 | cds-NP_012646.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:618574-619179:+ | gene-YJR112W_MUCL42920 | rna-NM_001181770.3_MUCL42920 | cds-NP_012646.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:637009-637614:+ | gene-YJR112W_NCIM3186 | rna-NM_001181770.3_NCIM3186 | cds-NP_012646.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:611629-612234:+ | gene-YJR112W_NCYC1407 | rna-NM_001181770.3_NCYC1407 | cds-NP_012646.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:629798-630403:+ | gene-YJR112W_PE2H3 | rna-NM_001181770.3_PE2H3 | cds-NP_012646.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:623487-624092:+ | gene-YJR112W_PE2H4 | rna-NM_001181770.3_PE2H4 | cds-NP_012646.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:637030-637635:+ | gene-YJR112W_S288C | rna-NM_001181770.3_S288C | cds-NP_012646.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:95872-96477:+ | gene-YJR112W_SA1 | rna-NM_001181770.3_SA1 | cds-NP_012646.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:618364-618969:+ | gene-YJR112W_ThermosaccDry | rna-NM_001181770.3_ThermosaccDry | cds-NP_012646.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:620742-621347:+ | gene-YJR112W_VR1 | rna-NM_001181770.3_VR1 | cds-NP_012646.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:597727-598332:+ | gene-YJR112W_ZTW1 | rna-NM_001181770.3_ZTW1 | cds-NP_012646.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:631917-632522:+ | gene-YJR112W_Sparadoxus | rna-NM_001181770.3_Sparadoxus | cds-NP_012646.3_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |