Gene name: NET1
Reference locus (S288C): YJL076W
Gene biotype: protein_coding
Description: Nucleolar protein NET1; Core subunit of the RENT complex; involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure; NET1 has a paralog, TOF2, that arose from the whole genome duplication; To yeast YKR010c
Top 10 interactors (score): TOF2 (0.999); SIR2 (0.999); CDC14 (0.999); FOB1 (0.996); CDC55 (0.995); DBF2 (0.966); TEM1 (0.958); SIR3 (0.946); SIR4 (0.942); CDC5 (0.933); CDC28 (0.928); CDC15 (0.92); ESP1 (0.915); CLB2 (0.908); SIR1 (0.906); TPD3 (0.895); PPH21 (0.891); SPO12 (0.887); LRS4 (0.887); SLK19 (0.868)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:278112-281681:+ | gene-YJL076W_AKU4011 | rna-NM_001181509.1_AKU4011 | cds-NP_012459.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:332833-336402:- | gene-YJL076W_BG1 | rna-NM_001181509.1_BG1 | cds-NP_012459.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:290651-294220:+ | gene-YJL076W_Bruggeman | rna-NM_001181509.1_Bruggeman | cds-NP_012459.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:294751-298320:+ | gene-YJL076W_CAT1 | rna-NM_001181509.1_CAT1 | cds-NP_012459.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:289770-293339:+ | gene-YJL076W_CBS1585 | rna-NM_001181509.1_CBS1585 | cds-NP_012459.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:307777-311346:+ | gene-YJL076W_CBS436 | rna-NM_001181509.1_CBS436 | cds-NP_012459.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:278870-282439:+ | gene-YJL076W_CBS6412 | rna-NM_001181509.1_CBS6412 | cds-NP_012459.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:280226-283795:+ | gene-YJL076W_CBS6413 | rna-NM_001181509.1_CBS6413 | cds-NP_012459.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:277715-281284:+ | gene-YJL076W_CENPK1137D | rna-NM_001181509.1_CENPK1137D | cds-NP_012459.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:281950-285519:+ | gene-YJL076W_EthanolRed | rna-NM_001181509.1_EthanolRed | cds-NP_012459.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:293525-297094:+ | gene-YJL076W_FaliES1 | rna-NM_001181509.1_FaliES1 | cds-NP_012459.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:91107-94676:+ | gene-YJL076W_JAY291 | rna-NM_001181509.1_JAY291 | cds-NP_012459.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:291808-295377:+ | gene-YJL076W_MUCL30387 | rna-NM_001181509.1_MUCL30387 | cds-NP_012459.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:287844-291413:+ | gene-YJL076W_MUCL30388 | rna-NM_001181509.1_MUCL30388 | cds-NP_012459.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:282522-286091:+ | gene-YJL076W_MUCL39482 | rna-NM_001181509.1_MUCL39482 | cds-NP_012459.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:288686-292741:+ | gene-YJL076W_MUCL42920 | rna-NM_001181509.1_MUCL42920 | cds-NP_012459.1_MUCL42920 | 87.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:295224-298793:+ | gene-YJL076W_NCIM3186 | rna-NM_001181509.1_NCIM3186 | cds-NP_012459.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:281218-284787:+ | gene-YJL076W_NCYC1407 | rna-NM_001181509.1_NCYC1407 | cds-NP_012459.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:293572-297141:+ | gene-YJL076W_PE2H3 | rna-NM_001181509.1_PE2H3 | cds-NP_012459.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:293216-296785:+ | gene-YJL076W_PE2H4 | rna-NM_001181509.1_PE2H4 | cds-NP_012459.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:295245-298814:+ | gene-YJL076W_S288C | rna-NM_001181509.1_S288C | cds-NP_012459.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:91134-94703:+ | gene-YJL076W_SA1 | rna-NM_001181509.1_SA1 | cds-NP_012459.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:286938-290507:+ | gene-YJL076W_ThermosaccDry | rna-NM_001181509.1_ThermosaccDry | cds-NP_012459.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:289114-292683:+ | gene-YJL076W_VR1 | rna-NM_001181509.1_VR1 | cds-NP_012459.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:268324-271893:+ | gene-YJL076W_ZTW1 | rna-NM_001181509.1_ZTW1 | cds-NP_012459.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:292262-295888:+ | gene-YJL076W_Sparadoxus | rna-NM_001181509.1_Sparadoxus | cds-NP_012459.1_Sparadoxus | 86.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |