Gene name: NEM1
Reference locus (S288C): YHR004C
Gene biotype: protein_coding
Description: Nuclear envelope morphology protein 1; Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology and sporulation; homolog of the human protein Dullard; Belongs to the Dullard family
Top 10 interactors (score): SPO7 (0.999); PAH1 (0.993); DGK1 (0.849); ICE2 (0.772); PPH21 (0.759); LPP1 (0.75); DPP1 (0.748); RRD2 (0.748); CDC55 (0.746); GLC7 (0.735); PPH3 (0.734); SDS22 (0.731); TPD3 (0.73); CMP2 (0.728); CNA1 (0.728); CNB1 (0.727); SIT4 (0.725); REG1 (0.721); GIP2 (0.721); REG2 (0.72)
Homologues (species, bitscore): CTDNEP1 (Homo sapiens, 157.1); Ctdnep1 (Mus musculus, 156.8); ctdnep1b (Danio rerio, 158.3); ctdsp2 (Xenopus tropicalis, 128.6); Dd (Drosophila melanogaster, 147.1); scpl-2 (Caenorhabditis elegans, 140.6); SSP4 (Arabidopsis thaliana, 114.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:100357-101697:- | gene-YHR004C_AKU4011 | rna-NM_001179134.1_AKU4011 | cds-NP_011867.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:20073-21413:- | gene-YHR004C_BG1 | rna-NM_001179134.1_BG1 | cds-NP_011867.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:107215-108555:- | gene-YHR004C_Bruggeman | rna-NM_001179134.1_Bruggeman | cds-NP_011867.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:101199-102539:- | gene-YHR004C_CAT1 | rna-NM_001179134.1_CAT1 | cds-NP_011867.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:100944-102284:- | gene-YHR004C_CBS1585 | rna-NM_001179134.1_CBS1585 | cds-NP_011867.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:93446-94786:- | gene-YHR004C_CBS436 | rna-NM_001179134.1_CBS436 | cds-NP_011867.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:100543-101883:- | gene-YHR004C_CBS6412 | rna-NM_001179134.1_CBS6412 | cds-NP_011867.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:100271-101611:- | gene-YHR004C_CBS6413 | rna-NM_001179134.1_CBS6413 | cds-NP_011867.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:104902-106242:- | gene-YHR004C_CENPK1137D | rna-NM_001179134.1_CENPK1137D | cds-NP_011867.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:100353-101693:- | gene-YHR004C_EthanolRed | rna-NM_001179134.1_EthanolRed | cds-NP_011867.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:100882-102222:- | gene-YHR004C_FaliES1 | rna-NM_001179134.1_FaliES1 | cds-NP_011867.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000064.1:19738-21078:+ | gene-YHR004C_JAY291 | rna-NM_001179134.1_JAY291 | cds-NP_011867.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:103955-105295:- | gene-YHR004C_MUCL30387 | rna-NM_001179134.1_MUCL30387 | cds-NP_011867.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:105166-106506:- | gene-YHR004C_MUCL30388 | rna-NM_001179134.1_MUCL30388 | cds-NP_011867.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:99970-101310:- | gene-YHR004C_MUCL39482 | rna-NM_001179134.1_MUCL39482 | cds-NP_011867.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:103875-105215:- | gene-YHR004C_MUCL42920 | rna-NM_001179134.1_MUCL42920 | cds-NP_011867.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:111636-112976:- | gene-YHR004C_NCIM3186 | rna-NM_001179134.1_NCIM3186 | cds-NP_011867.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:99388-100728:- | gene-YHR004C_NCYC1407 | rna-NM_001179134.1_NCYC1407 | cds-NP_011867.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:101592-102932:- | gene-YHR004C_PE2H3 | rna-NM_001179134.1_PE2H3 | cds-NP_011867.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:109033-110373:- | gene-YHR004C_PE2H4 | rna-NM_001179134.1_PE2H4 | cds-NP_011867.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:111754-113094:- | gene-YHR004C_S288C | rna-NM_001179134.1_S288C | cds-NP_011867.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:33458-34798:+ | gene-YHR004C_SA1 | rna-NM_001179134.1_SA1 | cds-NP_011867.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:101972-103312:- | gene-YHR004C_ThermosaccDry | rna-NM_001179134.1_ThermosaccDry | cds-NP_011867.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:107519-108859:- | gene-YHR004C_VR1 | rna-NM_001179134.1_VR1 | cds-NP_011867.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:93137-94477:- | gene-YHR004C_ZTW1 | rna-NM_001179134.1_ZTW1 | cds-NP_011867.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:99732-101075:- | gene-YHR004C_Sparadoxus | rna-NM_001179134.1_Sparadoxus | cds-NP_011867.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |