Gene name: NDT80
Reference locus (S288C): YHR124W
Gene biotype: protein_coding
Description: Meiosis-specific transcription factor; required for exit from pachytene and for full meiotic recombination; activates middle sporulation genes; competes with Sum1p for binding to promoters containing middle sporulation elements (MSE)
Top 10 interactors (score): IME2 (0.995); SPO11 (0.945); SUM1 (0.942); DMC1 (0.921); MEK1 (0.893); ZIP1 (0.891); CDC5 (0.89); IME1 (0.869); SIF2 (0.857); HOS4 (0.856); SET3 (0.856); CPR1 (0.856); SNT1 (0.856); REC8 (0.818); PCH2 (0.818); UME6 (0.792); TEC1 (0.789); HOP1 (0.789); HOS2 (0.783); MND2 (0.776)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:343487-345370:+ | gene-YHR124W_AKU4011 | rna-NM_001179254.1_AKU4011 | cds-NP_011992.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:172502-174385:- | gene-YHR124W_BG1 | rna-NM_001179254.1_BG1 | cds-NP_011992.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:350778-352661:+ | gene-YHR124W_Bruggeman | rna-NM_001179254.1_Bruggeman | cds-NP_011992.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:345915-347798:+ | gene-YHR124W_CAT1 | rna-NM_001179254.1_CAT1 | cds-NP_011992.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:342511-344394:+ | gene-YHR124W_CBS1585 | rna-NM_001179254.1_CBS1585 | cds-NP_011992.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:339870-341753:+ | gene-YHR124W_CBS436 | rna-NM_001179254.1_CBS436 | cds-NP_011992.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:343949-345832:+ | gene-YHR124W_CBS6412 | rna-NM_001179254.1_CBS6412 | cds-NP_011992.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:343538-345421:+ | gene-YHR124W_CBS6413 | rna-NM_001179254.1_CBS6413 | cds-NP_011992.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:349735-351618:+ | gene-YHR124W_CENPK1137D | rna-NM_001179254.1_CENPK1137D | cds-NP_011992.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:402392-404275:+ | gene-YHR124W_EthanolRed | rna-NM_001179254.1_EthanolRed | cds-NP_011992.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:343880-345763:+ | gene-YHR124W_FaliES1 | rna-NM_001179254.1_FaliES1 | cds-NP_011992.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000139.1:16496-18379:+ | gene-YHR124W_JAY291 | rna-NM_001179254.1_JAY291 | cds-NP_011992.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:350508-352391:+ | gene-YHR124W_MUCL30387 | rna-NM_001179254.1_MUCL30387 | cds-NP_011992.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:350155-352038:+ | gene-YHR124W_MUCL30388 | rna-NM_001179254.1_MUCL30388 | cds-NP_011992.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:342850-344733:+ | gene-YHR124W_MUCL39482 | rna-NM_001179254.1_MUCL39482 | cds-NP_011992.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:349090-350973:+ | gene-YHR124W_MUCL42920 | rna-NM_001179254.1_MUCL42920 | cds-NP_011992.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:356443-358326:+ | gene-YHR124W_NCIM3186 | rna-NM_001179254.1_NCIM3186 | cds-NP_011992.1_NCIM3186 | 84.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:345060-346943:+ | gene-YHR124W_NCYC1407 | rna-NM_001179254.1_NCYC1407 | cds-NP_011992.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:344512-346395:+ | gene-YHR124W_PE2H3 | rna-NM_001179254.1_PE2H3 | cds-NP_011992.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:351939-353822:+ | gene-YHR124W_PE2H4 | rna-NM_001179254.1_PE2H4 | cds-NP_011992.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:356561-358444:+ | gene-YHR124W_S288C | rna-NM_001179254.1_S288C | cds-NP_011992.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:526-2409:- | gene-YHR124W_SA1 | rna-NM_001179254.1_SA1 | cds-NP_011992.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:344963-346846:+ | gene-YHR124W_ThermosaccDry | rna-NM_001179254.1_ThermosaccDry | cds-NP_011992.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:352584-354467:+ | gene-YHR124W_VR1 | rna-NM_001179254.1_VR1 | cds-NP_011992.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:335974-337857:+ | gene-YHR124W_ZTW1 | rna-NM_001179254.1_ZTW1 | cds-NP_011992.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:341682-343565:+ | gene-YHR124W_Sparadoxus | rna-NM_001179254.1_Sparadoxus | cds-NP_011992.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |