Gene name: NDL1
Reference locus (S288C): YLR254C
Gene biotype: protein_coding
Description: Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends
Top 10 interactors (score): PAC1 (0.985); DYN1 (0.893); BIK1 (0.889); KIP3 (0.888); KIP2 (0.868); NIP100 (0.863); NUM1 (0.852); JNM1 (0.85); PAC11 (0.847); DYN3 (0.846); KAR9 (0.836); LDB18 (0.791); YLR280C (0.76); YIL152W (0.744); BIM1 (0.731); ARP10 (0.712); DYN2 (0.71); CIN8 (0.673); LCL2 (0.575); YDL012C (0.566)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:598616-599185:- | gene-YLR254C_AKU4011 | rna-NM_001182141.1_AKU4011 | cds-NP_013355.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:132712-133281:+ | gene-YLR254C_BG1 | rna-NM_001182141.1_BG1 | cds-NP_013355.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:632849-633418:- | gene-YLR254C_Bruggeman | rna-NM_001182141.1_Bruggeman | cds-NP_013355.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:631979-632548:- | gene-YLR254C_CAT1 | rna-NM_001182141.1_CAT1 | cds-NP_013355.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:634111-634680:- | gene-YLR254C_CBS1585 | rna-NM_001182141.1_CBS1585 | cds-NP_013355.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:618316-618885:- | gene-YLR254C_CBS436 | rna-NM_001182141.1_CBS436 | cds-NP_013355.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:597086-597655:- | gene-YLR254C_CBS6412 | rna-NM_001182141.1_CBS6412 | cds-NP_013355.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:634406-634975:- | gene-YLR254C_CBS6413 | rna-NM_001182141.1_CBS6413 | cds-NP_013355.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:629045-629614:- | gene-YLR254C_CENPK1137D | rna-NM_001182141.1_CENPK1137D | cds-NP_013355.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:592729-593298:- | gene-YLR254C_EthanolRed | rna-NM_001182141.1_EthanolRed | cds-NP_013355.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:621566-622135:- | gene-YLR254C_FaliES1 | rna-NM_001182141.1_FaliES1 | cds-NP_013355.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:37240-37805:+ | gene-YLR254C_JAY291 | rna-NM_001182141.1_JAY291 | cds-NP_013355.1_JAY291 | 99.1 | 99.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:633708-634277:- | gene-YLR254C_MUCL30387 | rna-NM_001182141.1_MUCL30387 | cds-NP_013355.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:637833-638402:- | gene-YLR254C_MUCL30388 | rna-NM_001182141.1_MUCL30388 | cds-NP_013355.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:635092-635661:- | gene-YLR254C_MUCL39482 | rna-NM_001182141.1_MUCL39482 | cds-NP_013355.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:629850-630419:- | gene-YLR254C_MUCL42920 | rna-NM_001182141.1_MUCL42920 | cds-NP_013355.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:644378-644947:- | gene-YLR254C_NCIM3186 | rna-NM_001182141.1_NCIM3186 | cds-NP_013355.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:622078-622647:- | gene-YLR254C_NCYC1407 | rna-NM_001182141.1_NCYC1407 | cds-NP_013355.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:625804-626369:- | gene-YLR254C_PE2H3 | rna-NM_001182141.1_PE2H3 | cds-NP_013355.1_PE2H3 | 99.1 | 99.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:625548-626113:- | gene-YLR254C_PE2H4 | rna-NM_001182141.1_PE2H4 | cds-NP_013355.1_PE2H4 | 99.1 | 99.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:644404-644973:- | gene-YLR254C_S288C | rna-NM_001182141.1_S288C | cds-NP_013355.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:37490-38059:+ | gene-YLR254C_SA1 | rna-NM_001182141.1_SA1 | cds-NP_013355.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:623574-624143:- | gene-YLR254C_ThermosaccDry | rna-NM_001182141.1_ThermosaccDry | cds-NP_013355.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:634921-635490:- | gene-YLR254C_VR1 | rna-NM_001182141.1_VR1 | cds-NP_013355.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:147890-148459:- | gene-YLR254C_ZTW1 | rna-NM_001182141.1_ZTW1 | cds-NP_013355.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:609694-610263:- | gene-YLR254C_Sparadoxus | rna-NM_001182141.1_Sparadoxus | cds-NP_013355.1_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |