Gene name: NDJ1
Reference locus (S288C): YOL104C
Gene biotype: protein_coding
Description: Non-disjunction protein 1; Protein that regulates meiotic SPB cohesion and telomere clustering; localizes to both spindle pole bodies (SPBs) and telomeres; required for bouquet formation, effective homolog pairing, ordered cross-over distribution, sister chromatid cohesion at meiotic telomeres, chromosomal segregation and telomere-led rapid prophase movement
Top 10 interactors (score): MPS3 (0.988); CSM4 (0.979); SPO11 (0.849); MSH4 (0.746); ZIP1 (0.744); MEK1 (0.672); PCH2 (0.669); RED1 (0.631); HFM1 (0.619); ZIP2 (0.612); SPO22 (0.575); ACT1 (0.526); TAZ1 (0.526); O0508 (0.525); MSH5 (0.499); YKR005C (0.485); DMC1 (0.483); MLH1 (0.483); YOL131W (0.482); SDD3 (0.48)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:105644-106702:- | gene-YOL104C_AKU4011 | rna-NM_001183358.1_AKU4011 | cds-NP_014537.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:70687-71745:- | gene-YOL104C_BG1 | rna-NM_001183358.1_BG1 | cds-NP_014537.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:107225-108283:- | gene-YOL104C_Bruggeman | rna-NM_001183358.1_Bruggeman | cds-NP_014537.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:106099-107157:- | gene-YOL104C_CAT1 | rna-NM_001183358.1_CAT1 | cds-NP_014537.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:100083-101141:- | gene-YOL104C_CBS1585 | rna-NM_001183358.1_CBS1585 | cds-NP_014537.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:105363-106421:- | gene-YOL104C_CBS436 | rna-NM_001183358.1_CBS436 | cds-NP_014537.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:100245-101303:- | gene-YOL104C_CBS6412 | rna-NM_001183358.1_CBS6412 | cds-NP_014537.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:106946-108004:- | gene-YOL104C_CBS6413 | rna-NM_001183358.1_CBS6413 | cds-NP_014537.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:116291-117349:- | gene-YOL104C_CENPK1137D | rna-NM_001183358.1_CENPK1137D | cds-NP_014537.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:103247-104305:- | gene-YOL104C_EthanolRed | rna-NM_001183358.1_EthanolRed | cds-NP_014537.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:105574-106632:- | gene-YOL104C_FaliES1 | rna-NM_001183358.1_FaliES1 | cds-NP_014537.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000160.1:36837-37895:+ | gene-YOL104C_JAY291 | rna-NM_001183358.1_JAY291 | cds-NP_014537.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:111429-112487:- | gene-YOL104C_MUCL30387 | rna-NM_001183358.1_MUCL30387 | cds-NP_014537.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:114612-115670:- | gene-YOL104C_MUCL30388 | rna-NM_001183358.1_MUCL30388 | cds-NP_014537.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:108005-109063:- | gene-YOL104C_MUCL39482 | rna-NM_001183358.1_MUCL39482 | cds-NP_014537.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:123777-124835:- | gene-YOL104C_MUCL42920 | rna-NM_001183358.1_MUCL42920 | cds-NP_014537.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:116285-117343:- | gene-YOL104C_NCIM3186 | rna-NM_001183358.1_NCIM3186 | cds-NP_014537.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:114601-115659:- | gene-YOL104C_NCYC1407 | rna-NM_001183358.1_NCYC1407 | cds-NP_014537.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:97901-98959:- | gene-YOL104C_PE2H3 | rna-NM_001183358.1_PE2H3 | cds-NP_014537.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:108878-109936:- | gene-YOL104C_PE2H4 | rna-NM_001183358.1_PE2H4 | cds-NP_014537.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:116396-117454:- | gene-YOL104C_S288C | rna-NM_001183358.1_S288C | cds-NP_014537.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:90198-91256:- | gene-YOL104C_SA1 | rna-NM_001183358.1_SA1 | cds-NP_014537.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:104582-105640:- | gene-YOL104C_ThermosaccDry | rna-NM_001183358.1_ThermosaccDry | cds-NP_014537.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:105148-106206:- | gene-YOL104C_VR1 | rna-NM_001183358.1_VR1 | cds-NP_014537.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:104281-105339:- | gene-YOL104C_ZTW1 | rna-NM_001183358.1_ZTW1 | cds-NP_014537.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:107699-108757:- | gene-YOL104C_Sparadoxus | rna-NM_001183358.1_Sparadoxus | cds-NP_014537.1_Sparadoxus | 84.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |