Gene name: NDE2
Reference locus (S288C): YDL085W
Gene biotype: protein_coding
Description: External NADH-ubiquinone oxidoreductase 2, mitochondrial; Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication
Top 10 interactors (score): SDH2 (0.96); GUT2 (0.958); RIP1 (0.958); CYT1 (0.944); YJL045W (0.943); COX4 (0.94); COX11 (0.935); COR1 (0.931); COX2 (0.931); ALD5 (0.93); ALD4 (0.927); HXT5 (0.924); QCR2 (0.923); HFD1 (0.918); COB (0.917); DLD1 (0.917); SDH1 (0.914); SDH4 (0.913); COX1 (0.913); CYB2 (0.913)
Homologues (species, bitscore): NDB2 (Arabidopsis thaliana, 312.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:287824-289461:+ | gene-YDL085W_AKU4011 | rna-NM_001180144.1_AKU4011 | cds-NP_010198.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:260487-262124:- | gene-YDL085W_BG1 | rna-NM_001180144.1_BG1 | cds-NP_010198.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:305494-307131:+ | gene-YDL085W_Bruggeman | rna-NM_001180144.1_Bruggeman | cds-NP_010198.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:301982-303619:+ | gene-YDL085W_CAT1 | rna-NM_001180144.1_CAT1 | cds-NP_010198.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:286096-287733:+ | gene-YDL085W_CBS1585 | rna-NM_001180144.1_CBS1585 | cds-NP_010198.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:302763-304400:+ | gene-YDL085W_CBS436 | rna-NM_001180144.1_CBS436 | cds-NP_010198.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:284524-286161:+ | gene-YDL085W_CBS6412 | rna-NM_001180144.1_CBS6412 | cds-NP_010198.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:304150-305787:+ | gene-YDL085W_CBS6413 | rna-NM_001180144.1_CBS6413 | cds-NP_010198.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:302034-303671:+ | gene-YDL085W_CENPK1137D | rna-NM_001180144.1_CENPK1137D | cds-NP_010198.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:298859-300496:+ | gene-YDL085W_EthanolRed | rna-NM_001180144.1_EthanolRed | cds-NP_010198.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:304831-306468:+ | gene-YDL085W_FaliES1 | rna-NM_001180144.1_FaliES1 | cds-NP_010198.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:74882-76519:+ | gene-YDL085W_JAY291 | rna-NM_001180144.1_JAY291 | cds-NP_010198.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:303010-304647:+ | gene-YDL085W_MUCL30387 | rna-NM_001180144.1_MUCL30387 | cds-NP_010198.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:294034-295671:+ | gene-YDL085W_MUCL30388 | rna-NM_001180144.1_MUCL30388 | cds-NP_010198.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:287201-288838:+ | gene-YDL085W_MUCL39482 | rna-NM_001180144.1_MUCL39482 | cds-NP_010198.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:209211-210848:+ | gene-YDL085W_MUCL42920 | rna-NM_001180144.1_MUCL42920 | cds-NP_010198.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:303134-304771:+ | gene-YDL085W_NCIM3186 | rna-NM_001180144.1_NCIM3186 | cds-NP_010198.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:287216-288853:+ | gene-YDL085W_NCYC1407 | rna-NM_001180144.1_NCYC1407 | cds-NP_010198.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:294000-295637:+ | gene-YDL085W_PE2H3 | rna-NM_001180144.1_PE2H3 | cds-NP_010198.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:293999-295636:+ | gene-YDL085W_PE2H4 | rna-NM_001180144.1_PE2H4 | cds-NP_010198.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:303211-304848:+ | gene-YDL085W_S288C | rna-NM_001180144.1_S288C | cds-NP_010198.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:130074-131711:- | gene-YDL085W_SA1 | rna-NM_001180144.1_SA1 | cds-NP_010198.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:304342-305979:+ | gene-YDL085W_ThermosaccDry | rna-NM_001180144.1_ThermosaccDry | cds-NP_010198.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:306418-308055:+ | gene-YDL085W_VR1 | rna-NM_001180144.1_VR1 | cds-NP_010198.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:302256-303893:+ | gene-YDL085W_ZTW1 | rna-NM_001180144.1_ZTW1 | cds-NP_010198.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:304348-305985:+ | gene-YDL085W_Sparadoxus | rna-NM_001180144.1_Sparadoxus | cds-NP_010198.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |