Gene name: NCW2
Reference locus (S288C): YLR194C
Gene biotype: protein_coding
Description: Structural constituent of the cell wall; attached to the plasma membrane by a GPI-anchor; expression is upregulated in response to cell wall stress; null mutant is sensitive to the antifungal agent polyhexamethylene biguanide, resistant to zymolyase treatment and has increased chitin deposition
Top 10 interactors (score): PUN1 (0.969); YPS3 (0.873); DIA1 (0.783); PRM5 (0.767); MNC1 (0.767); PIR3 (0.735); CRG1 (0.721); RCR1 (0.711); YOR385W (0.702); SRL3 (0.694); KDX1 (0.681); RLM1 (0.68); CWP1 (0.679); YNR065C (0.676); SLT2 (0.664); CMK2 (0.66); YPS1 (0.65); YPL088W (0.626); CCW14 (0.616); HSP150 (0.595)
Homologues (species, bitscore): mlt-11 (Caenorhabditis elegans, 52.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:494927-495691:- | gene-YLR194C_AKU4011 | rna-NM_001182081.1_AKU4011 | cds-NP_013295.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:52110-52874:- | gene-YLR194C_BG1 | rna-NM_001182081.1_BG1 | cds-NP_013295.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:535181-535945:- | gene-YLR194C_Bruggeman | rna-NM_001182081.1_Bruggeman | cds-NP_013295.1_Bruggeman | 99.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:534774-535538:- | gene-YLR194C_CAT1 | rna-NM_001182081.1_CAT1 | cds-NP_013295.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:530424-531188:- | gene-YLR194C_CBS1585 | rna-NM_001182081.1_CBS1585 | cds-NP_013295.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:520566-521330:- | gene-YLR194C_CBS436 | rna-NM_001182081.1_CBS436 | cds-NP_013295.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:498981-499745:- | gene-YLR194C_CBS6412 | rna-NM_001182081.1_CBS6412 | cds-NP_013295.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:530716-531480:- | gene-YLR194C_CBS6413 | rna-NM_001182081.1_CBS6413 | cds-NP_013295.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:525456-526220:- | gene-YLR194C_CENPK1137D | rna-NM_001182081.1_CENPK1137D | cds-NP_013295.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:494454-495218:- | gene-YLR194C_EthanolRed | rna-NM_001182081.1_EthanolRed | cds-NP_013295.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:523381-524145:- | gene-YLR194C_FaliES1 | rna-NM_001182081.1_FaliES1 | cds-NP_013295.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:50283-51047:- | gene-YLR194C_JAY291 | rna-NM_001182081.1_JAY291 | cds-NP_013295.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:535200-535964:- | gene-YLR194C_MUCL30387 | rna-NM_001182081.1_MUCL30387 | cds-NP_013295.1_MUCL30387 | 99.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:540134-540898:- | gene-YLR194C_MUCL30388 | rna-NM_001182081.1_MUCL30388 | cds-NP_013295.1_MUCL30388 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:531405-532169:- | gene-YLR194C_MUCL39482 | rna-NM_001182081.1_MUCL39482 | cds-NP_013295.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:531904-532668:- | gene-YLR194C_MUCL42920 | rna-NM_001182081.1_MUCL42920 | cds-NP_013295.1_MUCL42920 | 99.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:540783-541547:- | gene-YLR194C_NCIM3186 | rna-NM_001182081.1_NCIM3186 | cds-NP_013295.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:523834-524598:- | gene-YLR194C_NCYC1407 | rna-NM_001182081.1_NCYC1407 | cds-NP_013295.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:528072-528836:- | gene-YLR194C_PE2H3 | rna-NM_001182081.1_PE2H3 | cds-NP_013295.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:527816-528580:- | gene-YLR194C_PE2H4 | rna-NM_001182081.1_PE2H4 | cds-NP_013295.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:540809-541573:- | gene-YLR194C_S288C | rna-NM_001182081.1_S288C | cds-NP_013295.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:50341-51105:- | gene-YLR194C_SA1 | rna-NM_001182081.1_SA1 | cds-NP_013295.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:525884-526648:- | gene-YLR194C_ThermosaccDry | rna-NM_001182081.1_ThermosaccDry | cds-NP_013295.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:537185-537949:- | gene-YLR194C_VR1 | rna-NM_001182081.1_VR1 | cds-NP_013295.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:50174-50938:- | gene-YLR194C_ZTW1 | rna-NM_001182081.1_ZTW1 | cds-NP_013295.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:511943-512710:- | gene-YLR194C_Sparadoxus | rna-NM_001182081.1_Sparadoxus | cds-NP_013295.1_Sparadoxus | 84.9 | 98.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |