Gene name: NCW1
Reference locus (S288C): YMR122W-A
Gene biotype: protein_coding
Description: Uncharacterized endoplasmic reticulum membrane protein ymr122w-a; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and endoplasmic reticulum
Top 10 interactors (score): YDR524C-B (0.914); CWP2 (0.761); TMA64 (0.745); YJR061W (0.712); YDL218W (0.699); RLI1 (0.671); CBR1 (0.666); AGE1 (0.617); HOR7 (0.599); RPS30B (0.573); RPL14A (0.573); YPR169W-A (0.554); TMA20 (0.487); MNN4 (0.485); TMA22 (0.482); HSP150 (0.41)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:550694-550948:+ | gene-YMR122W-A_AKU4011 | rna-NM_001184445.1_AKU4011 | cds-NP_061493.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:121589-121843:- | gene-YMR122W-A_BG1 | rna-NM_001184445.1_BG1 | cds-NP_061493.1_BG1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:493616-493870:+ | gene-YMR122W-A_Bruggeman | rna-NM_001184445.1_Bruggeman | cds-NP_061493.1_Bruggeman | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:495288-495542:+ | gene-YMR122W-A_CAT1 | rna-NM_001184445.1_CAT1 | cds-NP_061493.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:483617-483871:+ | gene-YMR122W-A_CBS1585 | rna-NM_001184445.1_CBS1585 | cds-NP_061493.1_CBS1585 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:487481-487735:+ | gene-YMR122W-A_CBS436 | rna-NM_001184445.1_CBS436 | cds-NP_061493.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:596610-596864:+ | gene-YMR122W-A_CBS6412 | rna-NM_001184445.1_CBS6412 | cds-NP_061493.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:482177-482431:+ | gene-YMR122W-A_CBS6413 | rna-NM_001184445.1_CBS6413 | cds-NP_061493.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:505844-506098:+ | gene-YMR122W-A_CENPK1137D | rna-NM_001184445.1_CENPK1137D | cds-NP_061493.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:481935-482189:+ | gene-YMR122W-A_EthanolRed | rna-NM_001184445.1_EthanolRed | cds-NP_061493.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:487849-488103:+ | gene-YMR122W-A_FaliES1 | rna-NM_001184445.1_FaliES1 | cds-NP_061493.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000294.1:38992-39246:- | gene-YMR122W-A_JAY291 | rna-NM_001184445.1_JAY291 | cds-NP_061493.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:488595-488849:+ | gene-YMR122W-A_MUCL30387 | rna-NM_001184445.1_MUCL30387 | cds-NP_061493.1_MUCL30387 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:493711-493965:+ | gene-YMR122W-A_MUCL30388 | rna-NM_001184445.1_MUCL30388 | cds-NP_061493.1_MUCL30388 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:484318-484572:+ | gene-YMR122W-A_MUCL39482 | rna-NM_001184445.1_MUCL39482 | cds-NP_061493.1_MUCL39482 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:490731-490985:+ | gene-YMR122W-A_MUCL42920 | rna-NM_001184445.1_MUCL42920 | cds-NP_061493.1_MUCL42920 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:511269-511523:+ | gene-YMR122W-A_NCIM3186 | rna-NM_001184445.1_NCIM3186 | cds-NP_061493.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:483956-484210:+ | gene-YMR122W-A_NCYC1407 | rna-NM_001184445.1_NCYC1407 | cds-NP_061493.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:494388-494642:+ | gene-YMR122W-A_PE2H3 | rna-NM_001184445.1_PE2H3 | cds-NP_061493.1_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:494842-495096:+ | gene-YMR122W-A_PE2H4 | rna-NM_001184445.1_PE2H4 | cds-NP_061493.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:511315-511569:+ | gene-YMR122W-A_S288C | rna-NM_001184445.1_S288C | cds-NP_061493.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:59692-59946:- | gene-YMR122W-A_SA1 | rna-NM_001184445.1_SA1 | cds-NP_061493.1_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:484333-484587:+ | gene-YMR122W-A_ThermosaccDry | rna-NM_001184445.1_ThermosaccDry | cds-NP_061493.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:496337-496591:+ | gene-YMR122W-A_VR1 | rna-NM_001184445.1_VR1 | cds-NP_061493.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:459339-459593:+ | gene-YMR122W-A_ZTW1 | rna-NM_001184445.1_ZTW1 | cds-NP_061493.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:495565-495807:+ | gene-YMR122W-A_Sparadoxus | rna-NM_001184445.1_Sparadoxus | cds-NP_061493.1_Sparadoxus | 84.7 | 95.2 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |