NCP1 (YHR042W)


Gene profile

Gene name: NCP1
Reference locus (S288C): YHR042W
Gene biotype: protein_coding

Description: NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p; In the N-terminal section; belongs to the flavodoxin family

Top 10 interactors (score): ERG11 (0.988); CYB5 (0.973); SPS19 (0.935); CTT1 (0.929); CBR1 (0.926); POX1 (0.918); IDP2 (0.914); FOX2 (0.911); FMS1 (0.909); CAT2 (0.906); PFA5 (0.903); PXP1 (0.901); SWF1 (0.901); PFA4 (0.901); STE23 (0.9); YLR118C (0.9); TES1 (0.9); FAT1 (0.9); PCD1 (0.9); PMC1 (0.843)

Homologues (species, bitscore): POR (Homo sapiens, 340.1); Por (Mus musculus, 335.5); zgc:63480 (Danio rerio, 332.4); por (Xenopus tropicalis, 333.6); Cpr (Drosophila melanogaster, 344.0); emb-8 (Caenorhabditis elegans, 329.3); ATR1 (Arabidopsis thaliana, 304.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:178814-180889:+ gene-YHR042W_AKU4011 rna-NM_001179172.1_AKU4011 cds-NP_011908.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:99018-101093:+ gene-YHR042W_BG1 rna-NM_001179172.1_BG1 cds-NP_011908.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:186245-188320:+ gene-YHR042W_Bruggeman rna-NM_001179172.1_Bruggeman cds-NP_011908.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:180631-182706:+ gene-YHR042W_CAT1 rna-NM_001179172.1_CAT1 cds-NP_011908.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:179183-181258:+ gene-YHR042W_CBS1585 rna-NM_001179172.1_CBS1585 cds-NP_011908.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:173416-175491:+ gene-YHR042W_CBS436 rna-NM_001179172.1_CBS436 cds-NP_011908.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:178148-180223:+ gene-YHR042W_CBS6412 rna-NM_001179172.1_CBS6412 cds-NP_011908.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:178985-181060:+ gene-YHR042W_CBS6413 rna-NM_001179172.1_CBS6413 cds-NP_011908.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:183804-185879:+ gene-YHR042W_CENPK1137D rna-NM_001179172.1_CENPK1137D cds-NP_011908.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:178310-180385:+ gene-YHR042W_EthanolRed rna-NM_001179172.1_EthanolRed cds-NP_011908.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:179287-181362:+ gene-YHR042W_FaliES1 rna-NM_001179172.1_FaliES1 cds-NP_011908.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000273.1:270-2345:- gene-YHR042W_JAY291 rna-NM_001179172.1_JAY291 cds-NP_011908.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:185316-187391:+ gene-YHR042W_MUCL30387 rna-NM_001179172.1_MUCL30387 cds-NP_011908.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:185786-187861:+ gene-YHR042W_MUCL30388 rna-NM_001179172.1_MUCL30388 cds-NP_011908.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:178206-180281:+ gene-YHR042W_MUCL39482 rna-NM_001179172.1_MUCL39482 cds-NP_011908.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:184875-186950:+ gene-YHR042W_MUCL42920 rna-NM_001179172.1_MUCL42920 cds-NP_011908.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:190425-192500:+ gene-YHR042W_NCIM3186 rna-NM_001179172.1_NCIM3186 cds-NP_011908.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:178080-180155:+ gene-YHR042W_NCYC1407 rna-NM_001179172.1_NCYC1407 cds-NP_011908.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:180411-182486:+ gene-YHR042W_PE2H3 rna-NM_001179172.1_PE2H3 cds-NP_011908.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:187858-189933:+ gene-YHR042W_PE2H4 rna-NM_001179172.1_PE2H4 cds-NP_011908.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:190543-192618:+ gene-YHR042W_S288C rna-NM_001179172.1_S288C cds-NP_011908.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000014.1:165958-168033:- gene-YHR042W_SA1 rna-NM_001179172.1_SA1 cds-NP_011908.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:180378-182453:+ gene-YHR042W_ThermosaccDry rna-NM_001179172.1_ThermosaccDry cds-NP_011908.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:186909-188984:+ gene-YHR042W_VR1 rna-NM_001179172.1_VR1 cds-NP_011908.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:171926-174001:+ gene-YHR042W_ZTW1 rna-NM_001179172.1_ZTW1 cds-NP_011908.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:177989-180064:+ gene-YHR042W_Sparadoxus rna-NM_001179172.1_Sparadoxus cds-NP_011908.1_Sparadoxus 92.1 99.9 Verified 1 1 1 False True False False False

Additional files