Gene name: NBP35
Reference locus (S288C): YGL091C
Gene biotype: protein_coding
Description: Cytosolic Fe-S cluster assembly factor NBP35; Essential cytoplasmic iron-sulfur cluster binding protein; forms a complex with Cfd1p that is involved in iron-sulfur protein assembly in the cytosol; similar to P-loop NTPases
Top 10 interactors (score): NAR1 (0.999); DRE2 (0.999); TAH18 (0.999); MET18 (0.998); ATM1 (0.996); CIA2 (0.996); CFD1 (0.992); POL3 (0.984); CIA1 (0.983); NFS1 (0.966); ISD11 (0.956); RAD3 (0.953); YAE1 (0.948); RLI1 (0.945); DNA2 (0.927); ISU1 (0.9); IBA57 (0.897); GPN3 (0.894); NFU1 (0.893); GRX3 (0.888)
Homologues (species, bitscore): NUBP1 (Homo sapiens, 361.3); Nubp1 (Mus musculus, 369.4); nubp1 (Danio rerio, 395.2); nubp1 (Xenopus tropicalis, 315.5); CG17904 (Drosophila melanogaster, 305.1); F10G8.6 (Caenorhabditis elegans, 322.0); NBP35 (Arabidopsis thaliana, 349.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:345061-346047:- | gene-YGL091C_AKU4011 | rna-NM_001180956.3_AKU4011 | cds-NP_011424.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:59370-60356:+ | gene-YGL091C_BG1 | rna-NM_001180956.3_BG1 | cds-NP_011424.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:347553-348539:- | gene-YGL091C_Bruggeman | rna-NM_001180956.3_Bruggeman | cds-NP_011424.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:344446-345432:- | gene-YGL091C_CAT1 | rna-NM_001180956.3_CAT1 | cds-NP_011424.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:348386-349372:- | gene-YGL091C_CBS1585 | rna-NM_001180956.3_CBS1585 | cds-NP_011424.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:342670-343656:- | gene-YGL091C_CBS436 | rna-NM_001180956.3_CBS436 | cds-NP_011424.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:332767-333753:- | gene-YGL091C_CBS6412 | rna-NM_001180956.3_CBS6412 | cds-NP_011424.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:342692-343678:- | gene-YGL091C_CBS6413 | rna-NM_001180956.3_CBS6413 | cds-NP_011424.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:342243-343229:- | gene-YGL091C_CENPK1137D | rna-NM_001180956.3_CENPK1137D | cds-NP_011424.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:334146-335132:- | gene-YGL091C_EthanolRed | rna-NM_001180956.3_EthanolRed | cds-NP_011424.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:336707-337693:- | gene-YGL091C_FaliES1 | rna-NM_001180956.3_FaliES1 | cds-NP_011424.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000369.1:22317-23303:- | gene-YGL091C_JAY291 | rna-NM_001180956.3_JAY291 | cds-NP_011424.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:344530-345516:- | gene-YGL091C_MUCL30387 | rna-NM_001180956.3_MUCL30387 | cds-NP_011424.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:347516-348502:- | gene-YGL091C_MUCL30388 | rna-NM_001180956.3_MUCL30388 | cds-NP_011424.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:344914-345900:- | gene-YGL091C_MUCL39482 | rna-NM_001180956.3_MUCL39482 | cds-NP_011424.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:349441-350427:- | gene-YGL091C_MUCL42920 | rna-NM_001180956.3_MUCL42920 | cds-NP_011424.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:342056-343042:- | gene-YGL091C_NCIM3186 | rna-NM_001180956.3_NCIM3186 | cds-NP_011424.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:336449-337435:- | gene-YGL091C_NCYC1407 | rna-NM_001180956.3_NCYC1407 | cds-NP_011424.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:338083-339069:- | gene-YGL091C_PE2H3 | rna-NM_001180956.3_PE2H3 | cds-NP_011424.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:343080-344066:- | gene-YGL091C_PE2H4 | rna-NM_001180956.3_PE2H4 | cds-NP_011424.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:342056-343042:- | gene-YGL091C_S288C | rna-NM_001180956.3_S288C | cds-NP_011424.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000089.1:19437-20423:- | gene-YGL091C_SA1 | rna-NM_001180956.3_SA1 | cds-NP_011424.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:336960-337946:- | gene-YGL091C_ThermosaccDry | rna-NM_001180956.3_ThermosaccDry | cds-NP_011424.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:446821-447807:- | gene-YGL091C_VR1 | rna-NM_001180956.3_VR1 | cds-NP_011424.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:334314-335300:- | gene-YGL091C_ZTW1 | rna-NM_001180956.3_ZTW1 | cds-NP_011424.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:339976-340962:- | gene-YGL091C_Sparadoxus | rna-NM_001180956.3_Sparadoxus | cds-NP_011424.3_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |