Gene name: NBP2
Reference locus (S288C): YDR162C
Gene biotype: protein_coding
Description: NAP1-binding protein 2; Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm, contains an SH3 domain and a Ptc1p binding domain (PBM)
Top 10 interactors (score): PTC1 (0.999); PBS2 (0.99); BCK1 (0.977); STE20 (0.975); PTC2 (0.9); HOG1 (0.847); BBC1 (0.814); HSE1 (0.814); PTP2 (0.802); CLA4 (0.785); PTC3 (0.773); BUD14 (0.742); SLT2 (0.733); NAP1 (0.729); PTC6 (0.684); BOI2 (0.677); SMI1 (0.63); SHO1 (0.618); BEM1 (0.613); YSC84 (0.589)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:751685-752395:- | gene-YDR162C_AKU4011 | rna-NM_001180469.3_AKU4011 | cds-NP_010446.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:374359-375069:+ | gene-YDR162C_BG1 | rna-NM_001180469.3_BG1 | cds-NP_010446.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:783183-783893:- | gene-YDR162C_Bruggeman | rna-NM_001180469.3_Bruggeman | cds-NP_010446.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:770459-771169:- | gene-YDR162C_CAT1 | rna-NM_001180469.3_CAT1 | cds-NP_010446.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:742053-742763:- | gene-YDR162C_CBS1585 | rna-NM_001180469.3_CBS1585 | cds-NP_010446.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:768246-768956:- | gene-YDR162C_CBS436 | rna-NM_001180469.3_CBS436 | cds-NP_010446.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:737502-738212:- | gene-YDR162C_CBS6412 | rna-NM_001180469.3_CBS6412 | cds-NP_010446.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:765951-766661:- | gene-YDR162C_CBS6413 | rna-NM_001180469.3_CBS6413 | cds-NP_010446.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:781052-781762:- | gene-YDR162C_CENPK1137D | rna-NM_001180469.3_CENPK1137D | cds-NP_010446.3_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:751512-752222:- | gene-YDR162C_EthanolRed | rna-NM_001180469.3_EthanolRed | cds-NP_010446.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:759724-760434:- | gene-YDR162C_FaliES1 | rna-NM_001180469.3_FaliES1 | cds-NP_010446.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000119.1:21828-22538:+ | gene-YDR162C_JAY291 | rna-NM_001180469.3_JAY291 | cds-NP_010446.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:768561-769271:- | gene-YDR162C_MUCL30387 | rna-NM_001180469.3_MUCL30387 | cds-NP_010446.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:757071-757781:- | gene-YDR162C_MUCL30388 | rna-NM_001180469.3_MUCL30388 | cds-NP_010446.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:743480-744190:- | gene-YDR162C_MUCL39482 | rna-NM_001180469.3_MUCL39482 | cds-NP_010446.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:681305-682015:- | gene-YDR162C_MUCL42920 | rna-NM_001180469.3_MUCL42920 | cds-NP_010446.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:780313-781023:- | gene-YDR162C_NCIM3186 | rna-NM_001180469.3_NCIM3186 | cds-NP_010446.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:742884-743594:- | gene-YDR162C_NCYC1407 | rna-NM_001180469.3_NCYC1407 | cds-NP_010446.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:762078-762788:- | gene-YDR162C_PE2H3 | rna-NM_001180469.3_PE2H3 | cds-NP_010446.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:761383-762093:- | gene-YDR162C_PE2H4 | rna-NM_001180469.3_PE2H4 | cds-NP_010446.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:780390-781100:- | gene-YDR162C_S288C | rna-NM_001180469.3_S288C | cds-NP_010446.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:127589-128299:- | gene-YDR162C_SA1 | rna-NM_001180469.3_SA1 | cds-NP_010446.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:757859-758569:- | gene-YDR162C_ThermosaccDry | rna-NM_001180469.3_ThermosaccDry | cds-NP_010446.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:772847-773557:- | gene-YDR162C_VR1 | rna-NM_001180469.3_VR1 | cds-NP_010446.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:20610-21320:- | gene-YDR162C_ZTW1 | rna-NM_001180469.3_ZTW1 | cds-NP_010446.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:764080-764790:- | gene-YDR162C_Sparadoxus | rna-NM_001180469.3_Sparadoxus | cds-NP_010446.3_Sparadoxus | 87.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |