Gene name: NBP1
Reference locus (S288C): YLR457C
Gene biotype: protein_coding
Description: NAP1-binding protein; Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication
Top 10 interactors (score): MPS2 (0.958); BBP1 (0.926); SFI1 (0.903); MPS3 (0.895); SPC42 (0.888); CDC31 (0.832); SPC72 (0.788); KAR1 (0.773); SPC29 (0.765); SPC110 (0.762); CNM67 (0.748); POM152 (0.747); POM34 (0.65); CDC28 (0.632); SPC97 (0.61); GTT3 (0.573); UIP4 (0.572); UIP3 (0.57); BRR6 (0.569); YOP1 (0.53)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:994096-995055:- | gene-YLR457C_AKU4011 | rna-NM_001182345.3_AKU4011 | cds-NP_013562.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000002.1:2711-3670:+ | gene-YLR457C_BG1 | rna-NM_001182345.3_BG1 | cds-NP_013562.3_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:1033686-1034645:- | gene-YLR457C_Bruggeman | rna-NM_001182345.3_Bruggeman | cds-NP_013562.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:1028736-1029695:- | gene-YLR457C_CAT1 | rna-NM_001182345.3_CAT1 | cds-NP_013562.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:1029687-1030646:- | gene-YLR457C_CBS1585 | rna-NM_001182345.3_CBS1585 | cds-NP_013562.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:1019329-1020288:- | gene-YLR457C_CBS436 | rna-NM_001182345.3_CBS436 | cds-NP_013562.3_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:1065716-1066675:- | gene-YLR457C_CBS6412 | rna-NM_001182345.3_CBS6412 | cds-NP_013562.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:1030456-1031415:- | gene-YLR457C_CBS6413 | rna-NM_001182345.3_CBS6413 | cds-NP_013562.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:1040442-1041401:- | gene-YLR457C_CENPK1137D | rna-NM_001182345.3_CENPK1137D | cds-NP_013562.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:987113-988072:- | gene-YLR457C_EthanolRed | rna-NM_001182345.3_EthanolRed | cds-NP_013562.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:1022384-1023343:- | gene-YLR457C_FaliES1 | rna-NM_001182345.3_FaliES1 | cds-NP_013562.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000300.1:2588-3547:+ | gene-YLR457C_JAY291 | rna-NM_001182345.3_JAY291 | cds-NP_013562.3_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:1033167-1034126:- | gene-YLR457C_MUCL30387 | rna-NM_001182345.3_MUCL30387 | cds-NP_013562.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:1041079-1042038:- | gene-YLR457C_MUCL30388 | rna-NM_001182345.3_MUCL30388 | cds-NP_013562.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:1030921-1031880:- | gene-YLR457C_MUCL39482 | rna-NM_001182345.3_MUCL39482 | cds-NP_013562.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:1031370-1032329:- | gene-YLR457C_MUCL42920 | rna-NM_001182345.3_MUCL42920 | cds-NP_013562.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:1055786-1056745:- | gene-YLR457C_NCIM3186 | rna-NM_001182345.3_NCIM3186 | cds-NP_013562.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:1040357-1041316:- | gene-YLR457C_NCYC1407 | rna-NM_001182345.3_NCYC1407 | cds-NP_013562.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:1033050-1034009:- | gene-YLR457C_PE2H3 | rna-NM_001182345.3_PE2H3 | cds-NP_013562.3_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:1032794-1033753:- | gene-YLR457C_PE2H4 | rna-NM_001182345.3_PE2H4 | cds-NP_013562.3_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:1055812-1056771:- | gene-YLR457C_S288C | rna-NM_001182345.3_S288C | cds-NP_013562.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:2716-3675:+ | gene-YLR457C_SA1 | rna-NM_001182345.3_SA1 | cds-NP_013562.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:1025462-1026421:- | gene-YLR457C_ThermosaccDry | rna-NM_001182345.3_ThermosaccDry | cds-NP_013562.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:1032202-1033161:- | gene-YLR457C_VR1 | rna-NM_001182345.3_VR1 | cds-NP_013562.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:355714-356673:- | gene-YLR457C_ZTW1 | rna-NM_001182345.3_ZTW1 | cds-NP_013562.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:1005781-1006740:- | gene-YLR457C_Sparadoxus | rna-NM_001182345.3_Sparadoxus | cds-NP_013562.3_Sparadoxus | 86.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |