Gene name: NAS6
Reference locus (S288C): YGR232W
Gene biotype: protein_coding
Description: Probable 26S proteasome regulatory subunit p28; Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); ortholog of human oncoprotein gankyrin, also known as p28, which interacts with the Rb tumor suppressor and CDK4/6
Top 10 interactors (score): RPT1 (0.999); RPT6 (0.999); RPT3 (0.999); RPT4 (0.999); RPT2 (0.999); RPN14 (0.999); RPT5 (0.999); RPN9 (0.999); RPN10 (0.999); RPN11 (0.999); RPN1 (0.999); RPN3 (0.998); RPN8 (0.997); RPN5 (0.997); RPN6 (0.997); NAS2 (0.996); HSM3 (0.993); RPN7 (0.992); RPN13 (0.983); RPN2 (0.98)
Homologues (species, bitscore): PSMD10 (Homo sapiens, 114.8); Psmd10 (Mus musculus, 112.8); psmd10 (Danio rerio, 128.6); psmd10 (Xenopus tropicalis, 108.2); Tnks (Drosophila melanogaster, 86.7); F40G9.17 (Caenorhabditis elegans, 94.7); AT2G03430 (Arabidopsis thaliana, 122.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:919362-920048:+ | gene-YGR232W_AKU4011 | rna-NM_001181361.3_AKU4011 | cds-NP_011748.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:199477-200166:+ | gene-YGR232W_BG1 | rna-NM_001181361.3_BG1 | cds-NP_011748.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:926958-927647:+ | gene-YGR232W_Bruggeman | rna-NM_001181361.3_Bruggeman | cds-NP_011748.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:925657-926343:+ | gene-YGR232W_CAT1 | rna-NM_001181361.3_CAT1 | cds-NP_011748.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:922226-922912:+ | gene-YGR232W_CBS1585 | rna-NM_001181361.3_CBS1585 | cds-NP_011748.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:925884-926573:+ | gene-YGR232W_CBS436 | rna-NM_001181361.3_CBS436 | cds-NP_011748.3_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:913096-913782:+ | gene-YGR232W_CBS6412 | rna-NM_001181361.3_CBS6412 | cds-NP_011748.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:919155-919841:+ | gene-YGR232W_CBS6413 | rna-NM_001181361.3_CBS6413 | cds-NP_011748.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:953607-954293:+ | gene-YGR232W_CENPK1137D | rna-NM_001181361.3_CENPK1137D | cds-NP_011748.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:907365-908051:+ | gene-YGR232W_EthanolRed | rna-NM_001181361.3_EthanolRed | cds-NP_011748.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:912000-912686:+ | gene-YGR232W_FaliES1 | rna-NM_001181361.3_FaliES1 | cds-NP_011748.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:117589-118275:- | gene-YGR232W_JAY291 | rna-NM_001181361.3_JAY291 | cds-NP_011748.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:924874-925563:+ | gene-YGR232W_MUCL30387 | rna-NM_001181361.3_MUCL30387 | cds-NP_011748.3_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:924128-924817:+ | gene-YGR232W_MUCL30388 | rna-NM_001181361.3_MUCL30388 | cds-NP_011748.3_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:917301-917987:+ | gene-YGR232W_MUCL39482 | rna-NM_001181361.3_MUCL39482 | cds-NP_011748.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:935852-936538:+ | gene-YGR232W_MUCL42920 | rna-NM_001181361.3_MUCL42920 | cds-NP_011748.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:953960-954646:+ | gene-YGR232W_NCIM3186 | rna-NM_001181361.3_NCIM3186 | cds-NP_011748.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:912958-913644:+ | gene-YGR232W_NCYC1407 | rna-NM_001181361.3_NCYC1407 | cds-NP_011748.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:938155-938844:+ | gene-YGR232W_PE2H3 | rna-NM_001181361.3_PE2H3 | cds-NP_011748.3_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:942994-943683:+ | gene-YGR232W_PE2H4 | rna-NM_001181361.3_PE2H4 | cds-NP_011748.3_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:953960-954646:+ | gene-YGR232W_S288C | rna-NM_001181361.3_S288C | cds-NP_011748.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:46842-47531:- | gene-YGR232W_SA1 | rna-NM_001181361.3_SA1 | cds-NP_011748.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:932511-933197:+ | gene-YGR232W_ThermosaccDry | rna-NM_001181361.3_ThermosaccDry | cds-NP_011748.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1037300-1037986:+ | gene-YGR232W_VR1 | rna-NM_001181361.3_VR1 | cds-NP_011748.3_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:233943-234629:+ | gene-YGR232W_ZTW1 | rna-NM_001181361.3_ZTW1 | cds-NP_011748.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:924708-925394:+ | gene-YGR232W_Sparadoxus | rna-NM_001181361.3_Sparadoxus | cds-NP_011748.3_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |