Gene name: NAS2
Reference locus (S288C): YIL007C
Gene biotype: protein_coding
Description: Probable 26S proteasome regulatory subunit p27; Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); non-essential gene; interacts with Rpn4p; protein abundance increases in response to DNA replication stress; ortholog of human p27; Belongs to the proteasome subunit p27 family
Top 10 interactors (score): RPT1 (0.999); RPT4 (0.999); RPT5 (0.999); RPT6 (0.998); RPT3 (0.998); NAS6 (0.996); RPT2 (0.996); RPN2 (0.995); HSM3 (0.993); RPN1 (0.988); RPN5 (0.988); RPN14 (0.986); RPN10 (0.983); RPN6 (0.977); PRE1 (0.974); RPN3 (0.97); RPN11 (0.966); PRE10 (0.966); PRE7 (0.963); PRE9 (0.962)
Homologues (species, bitscore): PSMD9 (Homo sapiens, 127.1); Psmd9 (Mus musculus, 125.9); psmd9 (Danio rerio, 127.1); psmd9 (Xenopus tropicalis, 127.5); CG9588 (Drosophila melanogaster, 77.8); psmd-9 (Caenorhabditis elegans, 92.0); AT5G57950 (Arabidopsis thaliana, 71.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:342323-342985:- | gene-YIL007C_AKU4011 | rna-NM_001179357.3_AKU4011 | cds-NP_012259.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:83555-84217:+ | gene-YIL007C_BG1 | rna-NM_001179357.3_BG1 | cds-NP_012259.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:346848-347510:- | gene-YIL007C_Bruggeman | rna-NM_001179357.3_Bruggeman | cds-NP_012259.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:333491-334153:- | gene-YIL007C_CAT1 | rna-NM_001179357.3_CAT1 | cds-NP_012259.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:342396-343058:- | gene-YIL007C_CBS1585 | rna-NM_001179357.3_CBS1585 | cds-NP_012259.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:335124-335786:- | gene-YIL007C_CBS436 | rna-NM_001179357.3_CBS436 | cds-NP_012259.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:337802-338464:- | gene-YIL007C_CBS6412 | rna-NM_001179357.3_CBS6412 | cds-NP_012259.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:334483-335145:- | gene-YIL007C_CBS6413 | rna-NM_001179357.3_CBS6413 | cds-NP_012259.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:335055-335717:- | gene-YIL007C_CENPK1137D | rna-NM_001179357.3_CENPK1137D | cds-NP_012259.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:325436-326098:- | gene-YIL007C_EthanolRed | rna-NM_001179357.3_EthanolRed | cds-NP_012259.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:343682-344344:- | gene-YIL007C_FaliES1 | rna-NM_001179357.3_FaliES1 | cds-NP_012259.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:47137-47799:+ | gene-YIL007C_JAY291 | rna-NM_001179357.3_JAY291 | cds-NP_012259.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:344020-344682:- | gene-YIL007C_MUCL30387 | rna-NM_001179357.3_MUCL30387 | cds-NP_012259.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:340768-341430:- | gene-YIL007C_MUCL30388 | rna-NM_001179357.3_MUCL30388 | cds-NP_012259.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:343012-343674:- | gene-YIL007C_MUCL39482 | rna-NM_001179357.3_MUCL39482 | cds-NP_012259.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:346650-347312:- | gene-YIL007C_MUCL42920 | rna-NM_001179357.3_MUCL42920 | cds-NP_012259.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:342994-343656:- | gene-YIL007C_NCIM3186 | rna-NM_001179357.3_NCIM3186 | cds-NP_012259.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:347280-347942:- | gene-YIL007C_NCYC1407 | rna-NM_001179357.3_NCYC1407 | cds-NP_012259.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:337069-337731:- | gene-YIL007C_PE2H3 | rna-NM_001179357.3_PE2H3 | cds-NP_012259.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:331775-332437:- | gene-YIL007C_PE2H4 | rna-NM_001179357.3_PE2H4 | cds-NP_012259.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:342994-343656:- | gene-YIL007C_S288C | rna-NM_001179357.3_S288C | cds-NP_012259.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:17820-18482:- | gene-YIL007C_SA1 | rna-NM_001179357.3_SA1 | cds-NP_012259.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:341787-342449:- | gene-YIL007C_ThermosaccDry | rna-NM_001179357.3_ThermosaccDry | cds-NP_012259.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:337630-338292:- | gene-YIL007C_VR1 | rna-NM_001179357.3_VR1 | cds-NP_012259.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:315790-316452:- | gene-YIL007C_ZTW1 | rna-NM_001179357.3_ZTW1 | cds-NP_012259.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:337162-337824:- | gene-YIL007C_Sparadoxus | rna-NM_001179357.3_Sparadoxus | cds-NP_012259.3_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |