Gene name: NAM9
Reference locus (S288C): YNL137C
Gene biotype: protein_coding
Description: 37S ribosomal protein NAM9, mitochondrial; Mitochondrial ribosomal component of the small subunit; Belongs to the universal ribosomal protein uS4 family
Top 10 interactors (score): MRPS35 (0.999); MRPS9 (0.999); MRPS16 (0.999); RSM23 (0.999); MRPS5 (0.999); RSM10 (0.999); RSM26 (0.999); MRPS18 (0.999); RSM18 (0.999); MRP4 (0.998); MRP17 (0.998); RSM7 (0.998); RSM19 (0.998); MRPL7 (0.998); MRPS28 (0.998); MRPS8 (0.998); RSM27 (0.997); MRPL20 (0.996); MRP2 (0.996); RSM24 (0.996)
Homologues (species, bitscore): AtCg00380 (Arabidopsis thaliana, 58.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:362280-363740:- | gene-YNL137C_AKU4011 | rna-NM_001182975.3_AKU4011 | cds-NP_014262.3_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:266272-267732:- | gene-YNL137C_BG1 | rna-NM_001182975.3_BG1 | cds-NP_014262.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:372377-373837:- | gene-YNL137C_Bruggeman | rna-NM_001182975.3_Bruggeman | cds-NP_014262.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:415573-417033:- | gene-YNL137C_CAT1 | rna-NM_001182975.3_CAT1 | cds-NP_014262.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:362899-364359:- | gene-YNL137C_CBS1585 | rna-NM_001182975.3_CBS1585 | cds-NP_014262.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:431294-432754:- | gene-YNL137C_CBS436 | rna-NM_001182975.3_CBS436 | cds-NP_014262.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:358353-359813:- | gene-YNL137C_CBS6412 | rna-NM_001182975.3_CBS6412 | cds-NP_014262.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:359317-360777:- | gene-YNL137C_CBS6413 | rna-NM_001182975.3_CBS6413 | cds-NP_014262.3_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:362447-363907:- | gene-YNL137C_CENPK1137D | rna-NM_001182975.3_CENPK1137D | cds-NP_014262.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:359271-360731:- | gene-YNL137C_EthanolRed | rna-NM_001182975.3_EthanolRed | cds-NP_014262.3_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:355173-356633:- | gene-YNL137C_FaliES1 | rna-NM_001182975.3_FaliES1 | cds-NP_014262.3_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:11553-13013:- | gene-YNL137C_JAY291 | rna-NM_001182975.3_JAY291 | cds-NP_014262.3_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:368392-369852:- | gene-YNL137C_MUCL30387 | rna-NM_001182975.3_MUCL30387 | cds-NP_014262.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:403509-404969:- | gene-YNL137C_MUCL30388 | rna-NM_001182975.3_MUCL30388 | cds-NP_014262.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:360179-361639:- | gene-YNL137C_MUCL39482 | rna-NM_001182975.3_MUCL39482 | cds-NP_014262.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:363174-364634:- | gene-YNL137C_MUCL42920 | rna-NM_001182975.3_MUCL42920 | cds-NP_014262.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:368564-370024:- | gene-YNL137C_NCIM3186 | rna-NM_001182975.3_NCIM3186 | cds-NP_014262.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:362311-363771:- | gene-YNL137C_NCYC1407 | rna-NM_001182975.3_NCYC1407 | cds-NP_014262.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:359310-360770:- | gene-YNL137C_PE2H3 | rna-NM_001182975.3_PE2H3 | cds-NP_014262.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:358698-360158:- | gene-YNL137C_PE2H4 | rna-NM_001182975.3_PE2H4 | cds-NP_014262.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:368595-370055:- | gene-YNL137C_S288C | rna-NM_001182975.3_S288C | cds-NP_014262.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:43458-44918:+ | gene-YNL137C_SA1 | rna-NM_001182975.3_SA1 | cds-NP_014262.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:356027-357487:- | gene-YNL137C_ThermosaccDry | rna-NM_001182975.3_ThermosaccDry | cds-NP_014262.3_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:374690-376150:- | gene-YNL137C_VR1 | rna-NM_001182975.3_VR1 | cds-NP_014262.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:265861-267320:- | gene-YNL137C_ZTW1 | rna-NM_001182975.3_ZTW1 | cds-NP_014262.3_ZTW1 | 99.2 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:366833-368293:- | gene-YNL137C_Sparadoxus | rna-NM_001182975.3_Sparadoxus | cds-NP_014262.3_Sparadoxus | 90.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |