NAG1 (YGR031C-A)


Gene profile

Gene name: NAG1
Reference locus (S288C): YGR031C-A
Gene biotype: protein_coding

Description: Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32

Top 10 interactors (score): IMO32 (0.813); AUA1 (0.711); ADF1 (0.699); VAM10 (0.692); HUR1 (0.613); PRP38 (0.613); EMI1 (0.611); YKL075C (0.591); BUD25 (0.574); RSM7 (0.572); TAD3 (0.572); WWM1 (0.571); ECM11 (0.53); YBR099C (0.529); HEM14 (0.527); NKP2 (0.526); SET6 (0.525); FYV5 (0.524); DCR2 (0.487); IRC15 (0.454)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:542417-542908:- gene-YGR031C-A_AKU4011 rna-NM_001184658.1_AKU4011 cds-NP_001027023.1_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:32929-33420:+ gene-YGR031C-A_BG1 rna-NM_001184658.1_BG1 cds-NP_001027023.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:544695-545186:- gene-YGR031C-A_Bruggeman rna-NM_001184658.1_Bruggeman cds-NP_001027023.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:542752-543243:- gene-YGR031C-A_CAT1 rna-NM_001184658.1_CAT1 cds-NP_001027023.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:543748-544239:- gene-YGR031C-A_CBS1585 rna-NM_001184658.1_CBS1585 cds-NP_001027023.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:538534-539025:- gene-YGR031C-A_CBS436 rna-NM_001184658.1_CBS436 cds-NP_001027023.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:536506-536997:- gene-YGR031C-A_CBS6412 rna-NM_001184658.1_CBS6412 cds-NP_001027023.1_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:540592-541083:- gene-YGR031C-A_CBS6413 rna-NM_001184658.1_CBS6413 cds-NP_001027023.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:546650-547141:- gene-YGR031C-A_CENPK1137D rna-NM_001184658.1_CENPK1137D cds-NP_001027023.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:530632-531123:- gene-YGR031C-A_EthanolRed rna-NM_001184658.1_EthanolRed cds-NP_001027023.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:534119-534610:- gene-YGR031C-A_FaliES1 rna-NM_001184658.1_FaliES1 cds-NP_001027023.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:72821-73312:- gene-YGR031C-A_JAY291 rna-NM_001184658.1_JAY291 cds-NP_001027023.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:541329-541820:- gene-YGR031C-A_MUCL30387 rna-NM_001184658.1_MUCL30387 cds-NP_001027023.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:543948-544439:- gene-YGR031C-A_MUCL30388 rna-NM_001184658.1_MUCL30388 cds-NP_001027023.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:539570-540061:- gene-YGR031C-A_MUCL39482 rna-NM_001184658.1_MUCL39482 cds-NP_001027023.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:549363-549854:- gene-YGR031C-A_MUCL42920 rna-NM_001184658.1_MUCL42920 cds-NP_001027023.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:546809-547300:- gene-YGR031C-A_NCIM3186 rna-NM_001184658.1_NCIM3186 cds-NP_001027023.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:533753-534244:- gene-YGR031C-A_NCYC1407 rna-NM_001184658.1_NCYC1407 cds-NP_001027023.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:536643-537134:- gene-YGR031C-A_PE2H3 rna-NM_001184658.1_PE2H3 cds-NP_001027023.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:541750-542241:- gene-YGR031C-A_PE2H4 rna-NM_001184658.1_PE2H4 cds-NP_001027023.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:546809-547300:- gene-YGR031C-A_S288C rna-NM_001184658.1_S288C cds-NP_001027023.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:14616-15107:+ gene-YGR031C-A_SA1 rna-NM_001184658.1_SA1 cds-NP_001027023.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:553456-553947:- gene-YGR031C-A_ThermosaccDry rna-NM_001184658.1_ThermosaccDry cds-NP_001027023.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:643913-644404:- gene-YGR031C-A_VR1 rna-NM_001184658.1_VR1 cds-NP_001027023.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:8939-9430:- gene-YGR031C-A_ZTW1 rna-NM_001184658.1_ZTW1 cds-NP_001027023.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:542973-543464:- gene-YGR031C-A_Sparadoxus rna-NM_001184658.1_Sparadoxus cds-NP_001027023.1_Sparadoxus 85.9 100.0 Mismatch 1 1 0 False False False False True

Additional files