Gene name: MYO5
Reference locus (S288C): YMR109W
Gene biotype: protein_coding
Description: Myosin-5; One of two type I myosin motors; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
Top 10 interactors (score): CMD1 (0.999); LAS17 (0.999); VRP1 (0.998); BZZ1 (0.992); ARP2 (0.989); RVS167 (0.988); BBC1 (0.985); ACT1 (0.983); ABP1 (0.97); SHE4 (0.964); PAN1 (0.962); SAC6 (0.929); RVS161 (0.925); MYO3 (0.922); ARC15 (0.916); ARC40 (0.903); SLA2 (0.902); SLA1 (0.901); ARC18 (0.899); END3 (0.877)
Homologues (species, bitscore): MYO1E (Homo sapiens, 806.6); Myo1e (Mus musculus, 802.7); myo1f (Danio rerio, 794.7); myo1f (Xenopus tropicalis, 779.6); Myo61F (Drosophila melanogaster, 574.7); hum-1 (Caenorhabditis elegans, 731.9); XIH (Arabidopsis thaliana, 481.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:524761-528420:+ | gene-YMR109W_AKU4011 | rna-NM_001182609.1_AKU4011 | cds-NP_013827.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:14429-18076:- | gene-YMR109W_BG1 | rna-NM_001182609.1_BG1 | cds-NP_013827.1_BG1 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:466958-470605:+ | gene-YMR109W_Bruggeman | rna-NM_001182609.1_Bruggeman | cds-NP_013827.1_Bruggeman | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:467263-470910:+ | gene-YMR109W_CAT1 | rna-NM_001182609.1_CAT1 | cds-NP_013827.1_CAT1 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:458204-461863:+ | gene-YMR109W_CBS1585 | rna-NM_001182609.1_CBS1585 | cds-NP_013827.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:463131-466778:+ | gene-YMR109W_CBS436 | rna-NM_001182609.1_CBS436 | cds-NP_013827.1_CBS436 | 99.3 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:570812-574471:+ | gene-YMR109W_CBS6412 | rna-NM_001182609.1_CBS6412 | cds-NP_013827.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:456965-460624:+ | gene-YMR109W_CBS6413 | rna-NM_001182609.1_CBS6413 | cds-NP_013827.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:481113-484772:+ | gene-YMR109W_CENPK1137D | rna-NM_001182609.1_CENPK1137D | cds-NP_013827.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:457592-461251:+ | gene-YMR109W_EthanolRed | rna-NM_001182609.1_EthanolRed | cds-NP_013827.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:461602-465261:+ | gene-YMR109W_FaliES1 | rna-NM_001182609.1_FaliES1 | cds-NP_013827.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000380.1:14308-17955:- | gene-YMR109W_JAY291 | rna-NM_001182609.1_JAY291 | cds-NP_013827.1_JAY291 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:463879-467526:+ | gene-YMR109W_MUCL30387 | rna-NM_001182609.1_MUCL30387 | cds-NP_013827.1_MUCL30387 | 99.4 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:467868-471527:+ | gene-YMR109W_MUCL30388 | rna-NM_001182609.1_MUCL30388 | cds-NP_013827.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:458005-461664:+ | gene-YMR109W_MUCL39482 | rna-NM_001182609.1_MUCL39482 | cds-NP_013827.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:464783-468430:+ | gene-YMR109W_MUCL42920 | rna-NM_001182609.1_MUCL42920 | cds-NP_013827.1_MUCL42920 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:486541-490200:+ | gene-YMR109W_NCIM3186 | rna-NM_001182609.1_NCIM3186 | cds-NP_013827.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:457901-461560:+ | gene-YMR109W_NCYC1407 | rna-NM_001182609.1_NCYC1407 | cds-NP_013827.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:463728-467375:+ | gene-YMR109W_PE2H3 | rna-NM_001182609.1_PE2H3 | cds-NP_013827.1_PE2H3 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:469823-473470:+ | gene-YMR109W_PE2H4 | rna-NM_001182609.1_PE2H4 | cds-NP_013827.1_PE2H4 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:486587-490246:+ | gene-YMR109W_S288C | rna-NM_001182609.1_S288C | cds-NP_013827.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:81348-84995:- | gene-YMR109W_SA1 | rna-NM_001182609.1_SA1 | cds-NP_013827.1_SA1 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:458578-462237:+ | gene-YMR109W_ThermosaccDry | rna-NM_001182609.1_ThermosaccDry | cds-NP_013827.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:470314-473961:+ | gene-YMR109W_VR1 | rna-NM_001182609.1_VR1 | cds-NP_013827.1_VR1 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:434611-438270:+ | gene-YMR109W_ZTW1 | rna-NM_001182609.1_ZTW1 | cds-NP_013827.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:471553-475206:+ | gene-YMR109W_Sparadoxus | rna-NM_001182609.1_Sparadoxus | cds-NP_013827.1_Sparadoxus | 91.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |