Gene name: MYO4
Reference locus (S288C): YAL029C
Gene biotype: protein_coding
Description: Myosin-4; Type V myosin motor involved in actin-based transport of cargos; required for mRNA transport, including ASH1 mRNA, and facilitating the growth and movement of ER tubules into the growing bud along with She3p; MYO4 has a paralog, MYO2, that arose from the whole genome duplication
Top 10 interactors (score): SHE3 (0.999); SHE2 (0.999); CMD1 (0.997); ACT1 (0.984); MLC1 (0.984); SHE4 (0.982); ASH1 (0.971); YPT32 (0.968); YPT31 (0.941); MYO2 (0.93); BNI1 (0.926); YPT11 (0.921); HEK2 (0.919); MYO1 (0.916); SEC4 (0.882); PUF6 (0.88); TPM2 (0.864); LOC1 (0.857); TPM1 (0.838); IQG1 (0.834)
Homologues (species, bitscore): MYO5B (Homo sapiens, 797.7); Myo5b (Mus musculus, 792.7); ENSDARP00000122376 (Danio rerio, 786.2); myo5b (Xenopus tropicalis, 776.2); didum (Drosophila melanogaster, 720.3); hum-2 (Caenorhabditis elegans, 696.4); MYA2 (Arabidopsis thaliana, 658.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:72981-77396:- | gene-YAL029C_AKU4011 | rna-NM_001178174.1_AKU4011 | cds-NP_009373.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:60109-64524:- | gene-YAL029C_BG1 | rna-NM_001178174.1_BG1 | cds-NP_009373.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:87861-92276:- | gene-YAL029C_Bruggeman | rna-NM_001178174.1_Bruggeman | cds-NP_009373.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:74207-78622:- | gene-YAL029C_CAT1 | rna-NM_001178174.1_CAT1 | cds-NP_009373.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:85998-90413:- | gene-YAL029C_CBS1585 | rna-NM_001178174.1_CBS1585 | cds-NP_009373.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:86248-90663:- | gene-YAL029C_CBS436 | rna-NM_001178174.1_CBS436 | cds-NP_009373.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:72144-76559:- | gene-YAL029C_CBS6412 | rna-NM_001178174.1_CBS6412 | cds-NP_009373.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:84263-88678:- | gene-YAL029C_CBS6413 | rna-NM_001178174.1_CBS6413 | cds-NP_009373.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:87945-92360:- | gene-YAL029C_CENPK1137D | rna-NM_001178174.1_CENPK1137D | cds-NP_009373.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:74402-78817:- | gene-YAL029C_EthanolRed | rna-NM_001178174.1_EthanolRed | cds-NP_009373.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:89025-93440:- | gene-YAL029C_FaliES1 | rna-NM_001178174.1_FaliES1 | cds-NP_009373.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:60299-64714:- | gene-YAL029C_JAY291 | rna-NM_001178174.1_JAY291 | cds-NP_009373.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:88953-93368:- | gene-YAL029C_MUCL30387 | rna-NM_001178174.1_MUCL30387 | cds-NP_009373.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:85500-89915:- | gene-YAL029C_MUCL30388 | rna-NM_001178174.1_MUCL30388 | cds-NP_009373.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:84784-89199:- | gene-YAL029C_MUCL39482 | rna-NM_001178174.1_MUCL39482 | cds-NP_009373.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:87156-91571:- | gene-YAL029C_MUCL42920 | rna-NM_001178174.1_MUCL42920 | cds-NP_009373.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:87732-92147:- | gene-YAL029C_NCIM3186 | rna-NM_001178174.1_NCIM3186 | cds-NP_009373.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:72663-77078:- | gene-YAL029C_NCYC1407 | rna-NM_001178174.1_NCYC1407 | cds-NP_009373.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:74571-78986:- | gene-YAL029C_PE2H3 | rna-NM_001178174.1_PE2H3 | cds-NP_009373.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:74290-78705:- | gene-YAL029C_PE2H4 | rna-NM_001178174.1_PE2H4 | cds-NP_009373.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:87855-92270:- | gene-YAL029C_S288C | rna-NM_001178174.1_S288C | cds-NP_009373.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:16979-21394:- | gene-YAL029C_SA1 | rna-NM_001178174.1_SA1 | cds-NP_009373.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:88543-92958:- | gene-YAL029C_ThermosaccDry | rna-NM_001178174.1_ThermosaccDry | cds-NP_009373.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:89823-94238:- | gene-YAL029C_VR1 | rna-NM_001178174.1_VR1 | cds-NP_009373.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:60362-64777:- | gene-YAL029C_ZTW1 | rna-NM_001178174.1_ZTW1 | cds-NP_009373.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:77942-82360:- | gene-YAL029C_Sparadoxus | rna-NM_001178174.1_Sparadoxus | cds-NP_009373.1_Sparadoxus | 89.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |