Gene name: MTR2
Reference locus (S288C): YKL186C
Gene biotype: protein_coding
Description: mRNA transport regulator; essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA
Top 10 interactors (score): MEX67 (0.999); SAC3 (0.977); ARX1 (0.976); NUP116 (0.927); SUS1 (0.92); NUP84 (0.909); YRA1 (0.904); NMD3 (0.895); LSG1 (0.891); NUP85 (0.875); NUP159 (0.865); ECM1 (0.864); BUD20 (0.844); GLE1 (0.843); SEH1 (0.843); NAB2 (0.817); GLE2 (0.812); YVH1 (0.782); NUP120 (0.78); NUP42 (0.763)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:79600-80154:- | gene-YKL186C_AKU4011 | rna-NM_001179752.1_AKU4011 | cds-NP_012735.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:56126-56680:- | gene-YKL186C_BG1 | rna-NM_001179752.1_BG1 | cds-NP_012735.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:96988-97542:- | gene-YKL186C_Bruggeman | rna-NM_001179752.1_Bruggeman | cds-NP_012735.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:91945-92499:- | gene-YKL186C_CAT1 | rna-NM_001179752.1_CAT1 | cds-NP_012735.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:91582-92136:- | gene-YKL186C_CBS1585 | rna-NM_001179752.1_CBS1585 | cds-NP_012735.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:90341-90895:- | gene-YKL186C_CBS436 | rna-NM_001179752.1_CBS436 | cds-NP_012735.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:77172-77726:- | gene-YKL186C_CBS6412 | rna-NM_001179752.1_CBS6412 | cds-NP_012735.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:92300-92854:- | gene-YKL186C_CBS6413 | rna-NM_001179752.1_CBS6413 | cds-NP_012735.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:92571-93125:- | gene-YKL186C_CENPK1137D | rna-NM_001179752.1_CENPK1137D | cds-NP_012735.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:90486-91040:- | gene-YKL186C_EthanolRed | rna-NM_001179752.1_EthanolRed | cds-NP_012735.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:91187-91741:- | gene-YKL186C_FaliES1 | rna-NM_001179752.1_FaliES1 | cds-NP_012735.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:90170-90724:- | gene-YKL186C_JAY291 | rna-NM_001179752.1_JAY291 | cds-NP_012735.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:99287-99841:- | gene-YKL186C_MUCL30387 | rna-NM_001179752.1_MUCL30387 | cds-NP_012735.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:93632-94186:- | gene-YKL186C_MUCL30388 | rna-NM_001179752.1_MUCL30388 | cds-NP_012735.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:91639-92193:- | gene-YKL186C_MUCL39482 | rna-NM_001179752.1_MUCL39482 | cds-NP_012735.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:95974-96528:- | gene-YKL186C_MUCL42920 | rna-NM_001179752.1_MUCL42920 | cds-NP_012735.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:92733-93287:- | gene-YKL186C_NCIM3186 | rna-NM_001179752.1_NCIM3186 | cds-NP_012735.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:91663-92217:- | gene-YKL186C_NCYC1407 | rna-NM_001179752.1_NCYC1407 | cds-NP_012735.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:98713-99267:- | gene-YKL186C_PE2H3 | rna-NM_001179752.1_PE2H3 | cds-NP_012735.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:95007-95561:- | gene-YKL186C_PE2H4 | rna-NM_001179752.1_PE2H4 | cds-NP_012735.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:92744-93298:- | gene-YKL186C_S288C | rna-NM_001179752.1_S288C | cds-NP_012735.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:8947-9501:- | gene-YKL186C_SA1 | rna-NM_001179752.1_SA1 | cds-NP_012735.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:91887-92441:- | gene-YKL186C_ThermosaccDry | rna-NM_001179752.1_ThermosaccDry | cds-NP_012735.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:90418-90972:- | gene-YKL186C_VR1 | rna-NM_001179752.1_VR1 | cds-NP_012735.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:90289-90843:- | gene-YKL186C_ZTW1 | rna-NM_001179752.1_ZTW1 | cds-NP_012735.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:104849-105403:- | gene-YKL186C_Sparadoxus | rna-NM_001179752.1_Sparadoxus | cds-NP_012735.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |