Gene name: MTR10
Reference locus (S288C): YOR160W
Gene biotype: protein_coding
Description: mRNA transport regulator MTR10; Nuclear import receptor; mediates the nuclear localization of proteins involved in mRNA-nucleus export; promotes dissociation of mRNAs from the nucleus-cytoplasm mRNA shuttling protein Npl3p; required for retrograde import of mature tRNAs; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress
Top 10 interactors (score): NPL3 (0.999); LOS1 (0.993); KAP122 (0.979); GSP1 (0.976); KAP104 (0.971); MSN5 (0.959); CRM1 (0.955); NMD5 (0.949); PSE1 (0.949); KAP123 (0.948); NUP2 (0.945); SXM1 (0.944); KAP95 (0.943); KAP120 (0.932); CSE1 (0.913); KAP114 (0.894); SRP1 (0.874); RNA1 (0.87); GSP2 (0.856); HRB1 (0.854)
Homologues (species, bitscore): TNPO3 (Homo sapiens, 190.3); Tnpo3 (Mus musculus, 189.9); tnpo3 (Danio rerio, 180.3); tnpo3 (Xenopus tropicalis, 158.7); Trn-SR (Drosophila melanogaster, 209.5); tsr-1 (Caenorhabditis elegans, 82.0); MOS14 (Arabidopsis thaliana, 140.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:631475-634393:+ | gene-YOR160W_AKU4011 | rna-NM_001183579.1_AKU4011 | cds-NP_014803.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:33231-36149:+ | gene-YOR160W_BG1 | rna-NM_001183579.1_BG1 | cds-NP_014803.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:615548-618466:+ | gene-YOR160W_Bruggeman | rna-NM_001183579.1_Bruggeman | cds-NP_014803.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:615566-618484:+ | gene-YOR160W_CAT1 | rna-NM_001183579.1_CAT1 | cds-NP_014803.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:613970-616888:+ | gene-YOR160W_CBS1585 | rna-NM_001183579.1_CBS1585 | cds-NP_014803.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:612264-615182:+ | gene-YOR160W_CBS436 | rna-NM_001183579.1_CBS436 | cds-NP_014803.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:611582-614500:+ | gene-YOR160W_CBS6412 | rna-NM_001183579.1_CBS6412 | cds-NP_014803.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:620263-623181:+ | gene-YOR160W_CBS6413 | rna-NM_001183579.1_CBS6413 | cds-NP_014803.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:633598-636516:+ | gene-YOR160W_CENPK1137D | rna-NM_001183579.1_CENPK1137D | cds-NP_014803.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:607677-610595:+ | gene-YOR160W_EthanolRed | rna-NM_001183579.1_EthanolRed | cds-NP_014803.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:612530-615448:+ | gene-YOR160W_FaliES1 | rna-NM_001183579.1_FaliES1 | cds-NP_014803.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:28090-31008:- | gene-YOR160W_JAY291 | rna-NM_001183579.1_JAY291 | cds-NP_014803.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:620355-623273:+ | gene-YOR160W_MUCL30387 | rna-NM_001183579.1_MUCL30387 | cds-NP_014803.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:627118-630036:+ | gene-YOR160W_MUCL30388 | rna-NM_001183579.1_MUCL30388 | cds-NP_014803.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:621811-624729:+ | gene-YOR160W_MUCL39482 | rna-NM_001183579.1_MUCL39482 | cds-NP_014803.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:631232-634150:+ | gene-YOR160W_MUCL42920 | rna-NM_001183579.1_MUCL42920 | cds-NP_014803.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:633728-636646:+ | gene-YOR160W_NCIM3186 | rna-NM_001183579.1_NCIM3186 | cds-NP_014803.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:621897-624815:+ | gene-YOR160W_NCYC1407 | rna-NM_001183579.1_NCYC1407 | cds-NP_014803.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:620408-623326:+ | gene-YOR160W_PE2H3 | rna-NM_001183579.1_PE2H3 | cds-NP_014803.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:630785-633703:+ | gene-YOR160W_PE2H4 | rna-NM_001183579.1_PE2H4 | cds-NP_014803.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:633839-636757:+ | gene-YOR160W_S288C | rna-NM_001183579.1_S288C | cds-NP_014803.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:50394-53312:+ | gene-YOR160W_SA1 | rna-NM_001183579.1_SA1 | cds-NP_014803.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:611713-614631:+ | gene-YOR160W_ThermosaccDry | rna-NM_001183579.1_ThermosaccDry | cds-NP_014803.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:675411-678329:+ | gene-YOR160W_VR1 | rna-NM_001183579.1_VR1 | cds-NP_014803.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:345164-348082:+ | gene-YOR160W_ZTW1 | rna-NM_001183579.1_ZTW1 | cds-NP_014803.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:616842-619760:+ | gene-YOR160W_Sparadoxus | rna-NM_001183579.1_Sparadoxus | cds-NP_014803.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |