Gene name: MTM1
Reference locus (S288C): YGR257C
Gene biotype: protein_coding
Description: Mitochondrial protein of the mitochondrial carrier family; high affinity pyridoxal 5'-phosphate (PLP) transporter, important for delivery of PLP cofactor to mitochondrial enzymes; involved in mitochondrial iron homeostasis and in activating mitochondrial Sod2p by facilitating insertion of an essential manganese cofactor
Top 10 interactors (score): SMF2 (0.93); SOD2 (0.902); YGR237C (0.894); YMR1 (0.85); HEM1 (0.812); ATM1 (0.777); ISA1 (0.764); GRX5 (0.749); GGC1 (0.746); PUF3 (0.673); HEM4 (0.664); YJR085C (0.656); YFR045W (0.656); HEM12 (0.654); YAH1 (0.634); ISA2 (0.628); YHR045W (0.619); HEM3 (0.608); HEM2 (0.602); YMC2 (0.6)
Homologues (species, bitscore): SLC25A39 (Homo sapiens, 178.3); Slc25a39 (Mus musculus, 183.3); slc25a39 (Danio rerio, 208.8); slc25a40 (Xenopus tropicalis, 189.1); Shawn (Drosophila melanogaster, 180.6); C16C10.1 (Caenorhabditis elegans, 171.0); AT2G46320 (Arabidopsis thaliana, 159.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:971643-972743:- | gene-YGR257C_AKU4011 | rna-NM_001181386.3_AKU4011 | cds-NP_011773.3_AKU4011 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:251805-252905:- | gene-YGR257C_BG1 | rna-NM_001181386.3_BG1 | cds-NP_011773.3_BG1 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:980155-981255:- | gene-YGR257C_Bruggeman | rna-NM_001181386.3_Bruggeman | cds-NP_011773.3_Bruggeman | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:979098-980198:- | gene-YGR257C_CAT1 | rna-NM_001181386.3_CAT1 | cds-NP_011773.3_CAT1 | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:974513-975613:- | gene-YGR257C_CBS1585 | rna-NM_001181386.3_CBS1585 | cds-NP_011773.3_CBS1585 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:978135-979235:- | gene-YGR257C_CBS436 | rna-NM_001181386.3_CBS436 | cds-NP_011773.3_CBS436 | 99.3 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:965403-966503:- | gene-YGR257C_CBS6412 | rna-NM_001181386.3_CBS6412 | cds-NP_011773.3_CBS6412 | 98.9 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:971458-972558:- | gene-YGR257C_CBS6413 | rna-NM_001181386.3_CBS6413 | cds-NP_011773.3_CBS6413 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:1005886-1006986:- | gene-YGR257C_CENPK1137D | rna-NM_001181386.3_CENPK1137D | cds-NP_011773.3_CENPK1137D | 99.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:959486-960586:- | gene-YGR257C_EthanolRed | rna-NM_001181386.3_EthanolRed | cds-NP_011773.3_EthanolRed | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:964292-965392:- | gene-YGR257C_FaliES1 | rna-NM_001181386.3_FaliES1 | cds-NP_011773.3_FaliES1 | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:64919-66019:+ | gene-YGR257C_JAY291 | rna-NM_001181386.3_JAY291 | cds-NP_011773.3_JAY291 | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:977896-978996:- | gene-YGR257C_MUCL30387 | rna-NM_001181386.3_MUCL30387 | cds-NP_011773.3_MUCL30387 | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:976030-977130:- | gene-YGR257C_MUCL30388 | rna-NM_001181386.3_MUCL30388 | cds-NP_011773.3_MUCL30388 | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:969619-970719:- | gene-YGR257C_MUCL39482 | rna-NM_001181386.3_MUCL39482 | cds-NP_011773.3_MUCL39482 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:987484-988584:- | gene-YGR257C_MUCL42920 | rna-NM_001181386.3_MUCL42920 | cds-NP_011773.3_MUCL42920 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1006205-1007305:- | gene-YGR257C_NCIM3186 | rna-NM_001181386.3_NCIM3186 | cds-NP_011773.3_NCIM3186 | 98.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:965248-966348:- | gene-YGR257C_NCYC1407 | rna-NM_001181386.3_NCYC1407 | cds-NP_011773.3_NCYC1407 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:990428-991528:- | gene-YGR257C_PE2H3 | rna-NM_001181386.3_PE2H3 | cds-NP_011773.3_PE2H3 | 99.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:995267-996367:- | gene-YGR257C_PE2H4 | rna-NM_001181386.3_PE2H4 | cds-NP_011773.3_PE2H4 | 99.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1006205-1007305:- | gene-YGR257C_S288C | rna-NM_001181386.3_S288C | cds-NP_011773.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000063.1:4425-5525:- | gene-YGR257C_SA1 | rna-NM_001181386.3_SA1 | cds-NP_011773.3_SA1 | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:984812-985912:- | gene-YGR257C_ThermosaccDry | rna-NM_001181386.3_ThermosaccDry | cds-NP_011773.3_ThermosaccDry | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1090591-1091691:- | gene-YGR257C_VR1 | rna-NM_001181386.3_VR1 | cds-NP_011773.3_VR1 | 99.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:286232-287332:- | gene-YGR257C_ZTW1 | rna-NM_001181386.3_ZTW1 | cds-NP_011773.3_ZTW1 | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:976787-977887:- | gene-YGR257C_Sparadoxus | rna-NM_001181386.3_Sparadoxus | cds-NP_011773.3_Sparadoxus | 91.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |