Gene name: MTF2
Reference locus (S288C): YDL044C
Gene biotype: protein_coding
Description: Mitochondrial transcription factor 2; Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription
Top 10 interactors (score): RPO41 (0.971); PET309 (0.939); COX1 (0.861); PET111 (0.855); COB (0.825); SLS1 (0.804); MTF1 (0.779); AI4 (0.748); PET54 (0.714); PET494 (0.711); MSS51 (0.692); USB1 (0.684); RMD9 (0.674); AI5_BETA (0.672); MSS116 (0.67); PUF3 (0.669); AI1 (0.636); CCM1 (0.62); ATP6 (0.598); MNP1 (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:358587-359909:- | gene-YDL044C_AKU4011 | rna-NM_001180103.1_AKU4011 | cds-NP_010240.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:189795-191117:+ | gene-YDL044C_BG1 | rna-NM_001180103.1_BG1 | cds-NP_010240.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:377067-378389:- | gene-YDL044C_Bruggeman | rna-NM_001180103.1_Bruggeman | cds-NP_010240.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:373288-374610:- | gene-YDL044C_CAT1 | rna-NM_001180103.1_CAT1 | cds-NP_010240.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:356837-358159:- | gene-YDL044C_CBS1585 | rna-NM_001180103.1_CBS1585 | cds-NP_010240.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:373508-374830:- | gene-YDL044C_CBS436 | rna-NM_001180103.1_CBS436 | cds-NP_010240.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:354544-355866:- | gene-YDL044C_CBS6412 | rna-NM_001180103.1_CBS6412 | cds-NP_010240.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:374876-376198:- | gene-YDL044C_CBS6413 | rna-NM_001180103.1_CBS6413 | cds-NP_010240.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:372827-374149:- | gene-YDL044C_CENPK1137D | rna-NM_001180103.1_CENPK1137D | cds-NP_010240.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:369370-370692:- | gene-YDL044C_EthanolRed | rna-NM_001180103.1_EthanolRed | cds-NP_010240.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:375598-376920:- | gene-YDL044C_FaliES1 | rna-NM_001180103.1_FaliES1 | cds-NP_010240.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000097.1:8865-10187:+ | gene-YDL044C_JAY291 | rna-NM_001180103.1_JAY291 | cds-NP_010240.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:373734-375056:- | gene-YDL044C_MUCL30387 | rna-NM_001180103.1_MUCL30387 | cds-NP_010240.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:364852-366174:- | gene-YDL044C_MUCL30388 | rna-NM_001180103.1_MUCL30388 | cds-NP_010240.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:358041-359363:- | gene-YDL044C_MUCL39482 | rna-NM_001180103.1_MUCL39482 | cds-NP_010240.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:279958-281280:- | gene-YDL044C_MUCL42920 | rna-NM_001180103.1_MUCL42920 | cds-NP_010240.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:373890-375212:- | gene-YDL044C_NCIM3186 | rna-NM_001180103.1_NCIM3186 | cds-NP_010240.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:357922-359244:- | gene-YDL044C_NCYC1407 | rna-NM_001180103.1_NCYC1407 | cds-NP_010240.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:365100-366422:- | gene-YDL044C_PE2H3 | rna-NM_001180103.1_PE2H3 | cds-NP_010240.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:365102-366424:- | gene-YDL044C_PE2H4 | rna-NM_001180103.1_PE2H4 | cds-NP_010240.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:373967-375289:- | gene-YDL044C_S288C | rna-NM_001180103.1_S288C | cds-NP_010240.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:59638-60960:+ | gene-YDL044C_SA1 | rna-NM_001180103.1_SA1 | cds-NP_010240.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:375060-376382:- | gene-YDL044C_ThermosaccDry | rna-NM_001180103.1_ThermosaccDry | cds-NP_010240.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:377989-379311:- | gene-YDL044C_VR1 | rna-NM_001180103.1_VR1 | cds-NP_010240.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:373001-374323:- | gene-YDL044C_ZTW1 | rna-NM_001180103.1_ZTW1 | cds-NP_010240.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:375407-376729:- | gene-YDL044C_Sparadoxus | rna-NM_001180103.1_Sparadoxus | cds-NP_010240.1_Sparadoxus | 87.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |