Gene name: MTF1
Reference locus (S288C): YMR228W
Gene biotype: protein_coding
Description: Mitochondrial RNA polymerase specificity factor; has structural similarity to S-adenosylmethionine-dependent methyltransferases and functional similarity to bacterial sigma-factors; Mtf1p interacts with and stabilizes the Rpo41p-promoter complex, enhancing DNA bending and melting to facilitate pre-initiation open complex formation; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
Top 10 interactors (score): RPO41 (0.999); MTF2 (0.779); PUF3 (0.763); RIM1 (0.748); COX2 (0.686); SUV3 (0.678); MSS116 (0.676); COX3 (0.647); CTM1 (0.637); CBP1 (0.618); MRPL20 (0.616); MRPL38 (0.61); MRPL37 (0.604); SLM5 (0.573); FMP42 (0.572); YKL162C (0.568); MTQ1 (0.563); YGR021W (0.561); ATP6 (0.554); MRPL35 (0.54)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:764532-765557:+ | gene-YMR228W_AKU4011 | rna-NM_001182735.1_AKU4011 | cds-NP_013955.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:189033-190058:- | gene-YMR228W_BG1 | rna-NM_001182735.1_BG1 | cds-NP_013955.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:708759-709784:+ | gene-YMR228W_Bruggeman | rna-NM_001182735.1_Bruggeman | cds-NP_013955.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:712652-713677:+ | gene-YMR228W_CAT1 | rna-NM_001182735.1_CAT1 | cds-NP_013955.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:696792-697817:+ | gene-YMR228W_CBS1585 | rna-NM_001182735.1_CBS1585 | cds-NP_013955.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:701061-702086:+ | gene-YMR228W_CBS436 | rna-NM_001182735.1_CBS436 | cds-NP_013955.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:808354-809379:+ | gene-YMR228W_CBS6412 | rna-NM_001182735.1_CBS6412 | cds-NP_013955.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:695944-696969:+ | gene-YMR228W_CBS6413 | rna-NM_001182735.1_CBS6413 | cds-NP_013955.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:719369-720394:+ | gene-YMR228W_CENPK1137D | rna-NM_001182735.1_CENPK1137D | cds-NP_013955.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:756998-758023:+ | gene-YMR228W_EthanolRed | rna-NM_001182735.1_EthanolRed | cds-NP_013955.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:702650-703675:+ | gene-YMR228W_FaliES1 | rna-NM_001182735.1_FaliES1 | cds-NP_013955.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:82342-83367:- | gene-YMR228W_JAY291 | rna-NM_001182735.1_JAY291 | cds-NP_013955.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:702542-703567:+ | gene-YMR228W_MUCL30387 | rna-NM_001182735.1_MUCL30387 | cds-NP_013955.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:709770-710795:+ | gene-YMR228W_MUCL30388 | rna-NM_001182735.1_MUCL30388 | cds-NP_013955.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:697862-698887:+ | gene-YMR228W_MUCL39482 | rna-NM_001182735.1_MUCL39482 | cds-NP_013955.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:705206-706231:+ | gene-YMR228W_MUCL42920 | rna-NM_001182735.1_MUCL42920 | cds-NP_013955.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:724580-725605:+ | gene-YMR228W_NCIM3186 | rna-NM_001182735.1_NCIM3186 | cds-NP_013955.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:697519-698544:+ | gene-YMR228W_NCYC1407 | rna-NM_001182735.1_NCYC1407 | cds-NP_013955.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:707399-708424:+ | gene-YMR228W_PE2H3 | rna-NM_001182735.1_PE2H3 | cds-NP_013955.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:708417-709442:+ | gene-YMR228W_PE2H4 | rna-NM_001182735.1_PE2H4 | cds-NP_013955.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:724626-725651:+ | gene-YMR228W_S288C | rna-NM_001182735.1_S288C | cds-NP_013955.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:82457-83482:- | gene-YMR228W_SA1 | rna-NM_001182735.1_SA1 | cds-NP_013955.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:698821-699846:+ | gene-YMR228W_ThermosaccDry | rna-NM_001182735.1_ThermosaccDry | cds-NP_013955.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:711934-712959:+ | gene-YMR228W_VR1 | rna-NM_001182735.1_VR1 | cds-NP_013955.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:114526-115551:+ | gene-YMR228W_ZTW1 | rna-NM_001182735.1_ZTW1 | cds-NP_013955.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:716803-717828:+ | gene-YMR228W_Sparadoxus | rna-NM_001182735.1_Sparadoxus | cds-NP_013955.1_Sparadoxus | 90.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |