Gene name: MTC1
Reference locus (S288C): YJL123C
Gene biotype: protein_coding
Description: Maintenance of telomere capping protein 1; Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to COPI-coated vesicles (early Golgi); mtc1 is synthetically lethal with cdc13-1
Top 10 interactors (score): GET4 (0.918); YJL118W (0.861); FYV8 (0.82); TRS85 (0.799); COY1 (0.775); YMR196W (0.749); CRP1 (0.718); MRH1 (0.7); GCD14 (0.698); SKS1 (0.698); COG2 (0.673); GET3 (0.672); COG5 (0.633); ALB1 (0.614); RCK2 (0.597); MSP1 (0.59); COG6 (0.588); CDC37 (0.584); PTR2 (0.574); BBC1 (0.544)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:176324-177760:- | gene-YJL123C_AKU4011 | rna-NM_001181556.1_AKU4011 | cds-NP_012412.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:435977-437419:+ | gene-YJL123C_BG1 | rna-NM_001181556.1_BG1 | cds-NP_012412.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:188363-189808:- | gene-YJL123C_Bruggeman | rna-NM_001181556.1_Bruggeman | cds-NP_012412.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:192173-193618:- | gene-YJL123C_CAT1 | rna-NM_001181556.1_CAT1 | cds-NP_012412.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:181958-183394:- | gene-YJL123C_CBS1585 | rna-NM_001181556.1_CBS1585 | cds-NP_012412.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:206688-208133:- | gene-YJL123C_CBS436 | rna-NM_001181556.1_CBS436 | cds-NP_012412.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:177975-179414:- | gene-YJL123C_CBS6412 | rna-NM_001181556.1_CBS6412 | cds-NP_012412.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:179433-180869:- | gene-YJL123C_CBS6413 | rna-NM_001181556.1_CBS6413 | cds-NP_012412.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:170474-171910:- | gene-YJL123C_CENPK1137D | rna-NM_001181556.1_CENPK1137D | cds-NP_012412.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:180293-181729:- | gene-YJL123C_EthanolRed | rna-NM_001181556.1_EthanolRed | cds-NP_012412.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:185945-187381:- | gene-YJL123C_FaliES1 | rna-NM_001181556.1_FaliES1 | cds-NP_012412.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:67110-68553:- | gene-YJL123C_JAY291 | rna-NM_001181556.1_JAY291 | cds-NP_012412.1_JAY291 | 99.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:190631-192076:- | gene-YJL123C_MUCL30387 | rna-NM_001181556.1_MUCL30387 | cds-NP_012412.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:186709-188154:- | gene-YJL123C_MUCL30388 | rna-NM_001181556.1_MUCL30388 | cds-NP_012412.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:180904-182340:- | gene-YJL123C_MUCL39482 | rna-NM_001181556.1_MUCL39482 | cds-NP_012412.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:186697-188142:- | gene-YJL123C_MUCL42920 | rna-NM_001181556.1_MUCL42920 | cds-NP_012412.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:187983-189419:- | gene-YJL123C_NCIM3186 | rna-NM_001181556.1_NCIM3186 | cds-NP_012412.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:179311-180747:- | gene-YJL123C_NCYC1407 | rna-NM_001181556.1_NCYC1407 | cds-NP_012412.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:192090-193535:- | gene-YJL123C_PE2H3 | rna-NM_001181556.1_PE2H3 | cds-NP_012412.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:191734-193179:- | gene-YJL123C_PE2H4 | rna-NM_001181556.1_PE2H4 | cds-NP_012412.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:188004-189440:- | gene-YJL123C_S288C | rna-NM_001181556.1_S288C | cds-NP_012412.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000085.1:9724-11166:+ | gene-YJL123C_SA1 | rna-NM_001181556.1_SA1 | cds-NP_012412.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:179136-180572:- | gene-YJL123C_ThermosaccDry | rna-NM_001181556.1_ThermosaccDry | cds-NP_012412.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:186207-187652:- | gene-YJL123C_VR1 | rna-NM_001181556.1_VR1 | cds-NP_012412.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:166415-167851:- | gene-YJL123C_ZTW1 | rna-NM_001181556.1_ZTW1 | cds-NP_012412.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:191625-193043:- | gene-YJL123C_Sparadoxus | rna-NM_001181556.1_Sparadoxus | cds-NP_012412.1_Sparadoxus | 87.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |