Gene name: MSW1
Reference locus (S288C): YDR268W
Gene biotype: protein_coding
Description: Tryptophan--tRNA ligase, mitochondrial; Mitochondrial tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family
Top 10 interactors (score): MSF1 (0.981); MSY1 (0.968); MSK1 (0.956); AIM10 (0.952); NAM2 (0.95); WRS1 (0.949); SLM5 (0.937); KRS1 (0.936); TYS1 (0.932); THS1 (0.924); CDC60 (0.891); MST1 (0.877); DIA4 (0.86); ISM1 (0.856); GLN4 (0.849); TRP5 (0.845); MRPL24 (0.845); MSD1 (0.837); QRI7 (0.822); DED81 (0.82)
Homologues (species, bitscore): WARS2 (Homo sapiens, 257.3); Wars2 (Mus musculus, 249.2); wars2 (Danio rerio, 271.6); wars (Xenopus tropicalis, 52.0); CG7441 (Drosophila melanogaster, 249.2); prx-10 (Caenorhabditis elegans, 205.3); OVA4 (Arabidopsis thaliana, 207.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:956298-957437:+ | gene-YDR268W_AKU4011 | rna-NM_001180576.1_AKU4011 | cds-NP_010554.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:174893-176032:- | gene-YDR268W_BG1 | rna-NM_001180576.1_BG1 | cds-NP_010554.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:982469-983608:+ | gene-YDR268W_Bruggeman | rna-NM_001180576.1_Bruggeman | cds-NP_010554.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:970314-971453:+ | gene-YDR268W_CAT1 | rna-NM_001180576.1_CAT1 | cds-NP_010554.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:950743-951882:+ | gene-YDR268W_CBS1585 | rna-NM_001180576.1_CBS1585 | cds-NP_010554.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:968775-969914:+ | gene-YDR268W_CBS436 | rna-NM_001180576.1_CBS436 | cds-NP_010554.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:947426-948565:+ | gene-YDR268W_CBS6412 | rna-NM_001180576.1_CBS6412 | cds-NP_010554.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:968662-969801:+ | gene-YDR268W_CBS6413 | rna-NM_001180576.1_CBS6413 | cds-NP_010554.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1002647-1003786:+ | gene-YDR268W_CENPK1137D | rna-NM_001180576.1_CENPK1137D | cds-NP_010554.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:954844-955983:+ | gene-YDR268W_EthanolRed | rna-NM_001180576.1_EthanolRed | cds-NP_010554.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:963046-964185:+ | gene-YDR268W_FaliES1 | rna-NM_001180576.1_FaliES1 | cds-NP_010554.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000176.1:11299-12438:+ | gene-YDR268W_JAY291 | rna-NM_001180576.1_JAY291 | cds-NP_010554.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:968105-969244:+ | gene-YDR268W_MUCL30387 | rna-NM_001180576.1_MUCL30387 | cds-NP_010554.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:955814-956953:+ | gene-YDR268W_MUCL30388 | rna-NM_001180576.1_MUCL30388 | cds-NP_010554.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:942549-943688:+ | gene-YDR268W_MUCL39482 | rna-NM_001180576.1_MUCL39482 | cds-NP_010554.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:882545-883684:+ | gene-YDR268W_MUCL42920 | rna-NM_001180576.1_MUCL42920 | cds-NP_010554.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1003927-1005066:+ | gene-YDR268W_NCIM3186 | rna-NM_001180576.1_NCIM3186 | cds-NP_010554.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:955839-956978:+ | gene-YDR268W_NCYC1407 | rna-NM_001180576.1_NCYC1407 | cds-NP_010554.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:966471-967610:+ | gene-YDR268W_PE2H3 | rna-NM_001180576.1_PE2H3 | cds-NP_010554.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:971744-972883:+ | gene-YDR268W_PE2H4 | rna-NM_001180576.1_PE2H4 | cds-NP_010554.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1004004-1005143:+ | gene-YDR268W_S288C | rna-NM_001180576.1_S288C | cds-NP_010554.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000102.1:11625-12764:+ | gene-YDR268W_SA1 | rna-NM_001180576.1_SA1 | cds-NP_010554.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:967331-968470:+ | gene-YDR268W_ThermosaccDry | rna-NM_001180576.1_ThermosaccDry | cds-NP_010554.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:982924-984063:+ | gene-YDR268W_VR1 | rna-NM_001180576.1_VR1 | cds-NP_010554.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:11458-12597:+ | gene-YDR268W_ZTW1 | rna-NM_001180576.1_ZTW1 | cds-NP_010554.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:963743-964882:+ | gene-YDR268W_Sparadoxus | rna-NM_001180576.1_Sparadoxus | cds-NP_010554.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |