Gene name: MST28
Reference locus (S288C): YAR033W
Gene biotype: protein_coding
Description: Multicopy suppressor of SEC21 protein 28; Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member of DUP240 gene family; binds COPI and COPII vesicles; MST28 has a paralog, MST27, that arose from a segmental duplication
Top 10 interactors (score): MST27 (0.999); YAR028W (0.915); TPO5 (0.788); GOT1 (0.746); ENV10 (0.745); PRM9 (0.742); SEC24 (0.664); SLY41 (0.658); UIP3 (0.623); ERV14 (0.574); PET54 (0.571); GAB1 (0.569); GET2 (0.566); YIP1 (0.525); GET1 (0.499)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000042.1:549-1253:- | gene-YAR033W_AKU4011 | rna-NM_001178225.1_AKU4011 | cds-NP_009419.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000206.1:3818-4522:- | gene-YAR033W_BG1 | rna-NM_001178225.1_BG1 | cds-NP_009419.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:184789-185493:+ | gene-YAR033W_Bruggeman | rna-NM_001178225.1_Bruggeman | cds-NP_009419.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:183120-183824:+ | gene-YAR033W_CBS1585 | rna-NM_001178225.1_CBS1585 | cds-NP_009419.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:180603-181307:+ | gene-YAR033W_CBS436 | rna-NM_001178225.1_CBS436 | cds-NP_009419.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:399113-399817:+ | gene-YAR033W_CBS6412 | rna-NM_001178225.1_CBS6412 | cds-NP_009419.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:179373-180077:+ | gene-YAR033W_CBS6413 | rna-NM_001178225.1_CBS6413 | cds-NP_009419.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:188038-188751:+ | gene-YAR033W_CENPK1137D | rna-NM_001178225.1_CENPK1137D | cds-NP_009419.1_CENPK1137D | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:186546-187250:+ | gene-YAR033W_FaliES1 | rna-NM_001178225.1_FaliES1 | cds-NP_009419.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000197.1:23-727:+ | gene-YAR033W_JAY291 | rna-NM_001178225.1_JAY291 | cds-NP_009419.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:187398-188102:+ | gene-YAR033W_MUCL30387 | rna-NM_001178225.1_MUCL30387 | cds-NP_009419.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:184697-185401:+ | gene-YAR033W_MUCL30388 | rna-NM_001178225.1_MUCL30388 | cds-NP_009419.1_MUCL30388 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:178777-179481:+ | gene-YAR033W_MUCL39482 | rna-NM_001178225.1_MUCL39482 | cds-NP_009419.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000311.1:240-944:- | gene-YAR033W_MUCL42920 | rna-NM_001178225.1_MUCL42920 | cds-NP_009419.1_MUCL42920 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:187984-188688:+ | gene-YAR033W_NCIM3186 | rna-NM_001178225.1_NCIM3186 | cds-NP_009419.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:165128-165832:+ | gene-YAR033W_NCYC1407 | rna-NM_001178225.1_NCYC1407 | cds-NP_009419.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:175467-176171:+ | gene-YAR033W_PE2H3 | rna-NM_001178225.1_PE2H3 | cds-NP_009419.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:175186-175890:+ | gene-YAR033W_PE2H4 | rna-NM_001178225.1_PE2H4 | cds-NP_009419.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:188107-188811:+ | gene-YAR033W_S288C | rna-NM_001178225.1_S288C | cds-NP_009419.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000211.1:581-1201:- | gene-YAR033W_SA1 | rna-NM_001178225.1_SA1 | cds-NP_009419.1_SA1 | 87.0 | 88.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:183622-184326:+ | gene-YAR033W_ThermosaccDry | rna-NM_001178225.1_ThermosaccDry | cds-NP_009419.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:191948-192652:+ | gene-YAR033W_VR1 | rna-NM_001178225.1_VR1 | cds-NP_009419.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:159179-159883:+ | gene-YAR033W_ZTW1 | rna-NM_001178225.1_ZTW1 | cds-NP_009419.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:178536-179258:+ | gene-YAR033W_Sparadoxus | rna-NM_001178225.1_Sparadoxus | cds-NP_009419.1_Sparadoxus | 79.3 | 98.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |