Gene name: MST1
Reference locus (S288C): YKL194C
Gene biotype: protein_coding
Description: Threonine--tRNA ligase, mitochondrial; Mitochondrial threonyl-tRNA synthetase; aminoacylates both the canonical threonine tRNA tT(UGU)Q1 and the unusual threonine tRNA tT(UAG)Q2 in vitro; lacks a typical editing domain, but has pre-transfer editing activity stimulated by the unusual tRNA-Thr
Top 10 interactors (score): ILS1 (0.942); NAM2 (0.937); CDC60 (0.928); VAS1 (0.921); TYS1 (0.912); ISM1 (0.899); GRS1 (0.895); MSY1 (0.893); MRPL9 (0.891); MRPL1 (0.888); GRS2 (0.888); YHR020W (0.885); TRP5 (0.882); GLN4 (0.88); SES1 (0.879); MSW1 (0.877); AIM10 (0.875); HTS1 (0.867); MRPL19 (0.863); ALA1 (0.86)
Homologues (species, bitscore): TARS2 (Homo sapiens, 366.7); Tars (Mus musculus, 368.2); tars (Danio rerio, 364.8); tars (Xenopus tropicalis, 372.1); Aats-thr (Drosophila melanogaster, 378.3); tars-1 (Caenorhabditis elegans, 371.3); AT5G26830 (Arabidopsis thaliana, 388.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:63620-65008:- | gene-YKL194C_AKU4011 | rna-NM_001179760.1_AKU4011 | cds-NP_012727.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:40586-41974:- | gene-YKL194C_BG1 | rna-NM_001179760.1_BG1 | cds-NP_012727.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:81271-82634:- | gene-YKL194C_Bruggeman | rna-NM_001179760.1_Bruggeman | cds-NP_012727.1_Bruggeman | 97.2 | 98.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:76443-77831:- | gene-YKL194C_CAT1 | rna-NM_001179760.1_CAT1 | cds-NP_012727.1_CAT1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:75605-76993:- | gene-YKL194C_CBS1585 | rna-NM_001179760.1_CBS1585 | cds-NP_012727.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:74836-76224:- | gene-YKL194C_CBS436 | rna-NM_001179760.1_CBS436 | cds-NP_012727.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:60857-62245:- | gene-YKL194C_CBS6412 | rna-NM_001179760.1_CBS6412 | cds-NP_012727.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:76242-77630:- | gene-YKL194C_CBS6413 | rna-NM_001179760.1_CBS6413 | cds-NP_012727.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:77036-78424:- | gene-YKL194C_CENPK1137D | rna-NM_001179760.1_CENPK1137D | cds-NP_012727.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:75053-76416:- | gene-YKL194C_EthanolRed | rna-NM_001179760.1_EthanolRed | cds-NP_012727.1_EthanolRed | 97.4 | 98.2 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:75112-76500:- | gene-YKL194C_FaliES1 | rna-NM_001179760.1_FaliES1 | cds-NP_012727.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:74669-76056:- | gene-YKL194C_JAY291 | rna-NM_001179760.1_JAY291 | cds-NP_012727.1_JAY291 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:83802-85190:- | gene-YKL194C_MUCL30387 | rna-NM_001179760.1_MUCL30387 | cds-NP_012727.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:77894-79282:- | gene-YKL194C_MUCL30388 | rna-NM_001179760.1_MUCL30388 | cds-NP_012727.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:75662-77050:- | gene-YKL194C_MUCL39482 | rna-NM_001179760.1_MUCL39482 | cds-NP_012727.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:79204-80592:- | gene-YKL194C_MUCL42920 | rna-NM_001179760.1_MUCL42920 | cds-NP_012727.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:77247-78635:- | gene-YKL194C_NCIM3186 | rna-NM_001179760.1_NCIM3186 | cds-NP_012727.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:75686-77074:- | gene-YKL194C_NCYC1407 | rna-NM_001179760.1_NCYC1407 | cds-NP_012727.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:83209-84597:- | gene-YKL194C_PE2H3 | rna-NM_001179760.1_PE2H3 | cds-NP_012727.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:79503-80891:- | gene-YKL194C_PE2H4 | rna-NM_001179760.1_PE2H4 | cds-NP_012727.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:77258-78646:- | gene-YKL194C_S288C | rna-NM_001179760.1_S288C | cds-NP_012727.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000113.1:11138-12526:- | gene-YKL194C_SA1 | rna-NM_001179760.1_SA1 | cds-NP_012727.1_SA1 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:75860-77248:- | gene-YKL194C_ThermosaccDry | rna-NM_001179760.1_ThermosaccDry | cds-NP_012727.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:74915-76303:- | gene-YKL194C_VR1 | rna-NM_001179760.1_VR1 | cds-NP_012727.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:74783-76171:- | gene-YKL194C_ZTW1 | rna-NM_001179760.1_ZTW1 | cds-NP_012727.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:89064-90452:- | gene-YKL194C_Sparadoxus | rna-NM_001179760.1_Sparadoxus | cds-NP_012727.1_Sparadoxus | 89.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |