Gene name: MSS4
Reference locus (S288C): YDR208W
Gene biotype: protein_coding
Description: Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation
Top 10 interactors (score): STT4 (0.999); PIK1 (0.996); SAC1 (0.99); INP52 (0.984); PLC1 (0.983); INP51 (0.98); LSB6 (0.979); INP53 (0.978); INP54 (0.973); TEP1 (0.956); PBS2 (0.929); EFR3 (0.914); SEC8 (0.91); CDC42 (0.909); MKK1 (0.908); MKK2 (0.908); STE7 (0.904); ARF3 (0.887); SEC15 (0.877); SPO14 (0.874)
Homologues (species, bitscore): PIP5K1C (Homo sapiens, 197.2); Pip5k1a (Mus musculus, 195.7); pip5k1cb (Danio rerio, 199.9); pip5k1a (Xenopus tropicalis, 194.9); PIP5K59B (Drosophila melanogaster, 189.5); ppk-1 (Caenorhabditis elegans, 190.3); PIP5K5 (Arabidopsis thaliana, 218.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:836761-839100:+ | gene-YDR208W_AKU4011 | rna-NM_001180516.1_AKU4011 | cds-NP_010494.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:286689-289031:- | gene-YDR208W_BG1 | rna-NM_001180516.1_BG1 | cds-NP_010494.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:869167-871506:+ | gene-YDR208W_Bruggeman | rna-NM_001180516.1_Bruggeman | cds-NP_010494.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:856436-858775:+ | gene-YDR208W_CAT1 | rna-NM_001180516.1_CAT1 | cds-NP_010494.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:827121-829460:+ | gene-YDR208W_CBS1585 | rna-NM_001180516.1_CBS1585 | cds-NP_010494.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:856173-858515:+ | gene-YDR208W_CBS436 | rna-NM_001180516.1_CBS436 | cds-NP_010494.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:823928-826267:+ | gene-YDR208W_CBS6412 | rna-NM_001180516.1_CBS6412 | cds-NP_010494.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:854472-856811:+ | gene-YDR208W_CBS6413 | rna-NM_001180516.1_CBS6413 | cds-NP_010494.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:867056-869395:+ | gene-YDR208W_CENPK1137D | rna-NM_001180516.1_CENPK1137D | cds-NP_010494.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:837498-839837:+ | gene-YDR208W_EthanolRed | rna-NM_001180516.1_EthanolRed | cds-NP_010494.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:845710-848049:+ | gene-YDR208W_FaliES1 | rna-NM_001180516.1_FaliES1 | cds-NP_010494.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000068.1:1301-3643:- | gene-YDR208W_JAY291 | rna-NM_001180516.1_JAY291 | cds-NP_010494.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:854823-857162:+ | gene-YDR208W_MUCL30387 | rna-NM_001180516.1_MUCL30387 | cds-NP_010494.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:843072-845411:+ | gene-YDR208W_MUCL30388 | rna-NM_001180516.1_MUCL30388 | cds-NP_010494.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:828568-830907:+ | gene-YDR208W_MUCL39482 | rna-NM_001180516.1_MUCL39482 | cds-NP_010494.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:767268-769607:+ | gene-YDR208W_MUCL42920 | rna-NM_001180516.1_MUCL42920 | cds-NP_010494.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:868147-870486:+ | gene-YDR208W_NCIM3186 | rna-NM_001180516.1_NCIM3186 | cds-NP_010494.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:831702-834041:+ | gene-YDR208W_NCYC1407 | rna-NM_001180516.1_NCYC1407 | cds-NP_010494.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:848440-850782:+ | gene-YDR208W_PE2H3 | rna-NM_001180516.1_PE2H3 | cds-NP_010494.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:847757-850099:+ | gene-YDR208W_PE2H4 | rna-NM_001180516.1_PE2H4 | cds-NP_010494.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:868224-870563:+ | gene-YDR208W_S288C | rna-NM_001180516.1_S288C | cds-NP_010494.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:213936-216278:+ | gene-YDR208W_SA1 | rna-NM_001180516.1_SA1 | cds-NP_010494.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:843865-846204:+ | gene-YDR208W_ThermosaccDry | rna-NM_001180516.1_ThermosaccDry | cds-NP_010494.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:859087-861429:+ | gene-YDR208W_VR1 | rna-NM_001180516.1_VR1 | cds-NP_010494.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:106588-108927:+ | gene-YDR208W_ZTW1 | rna-NM_001180516.1_ZTW1 | cds-NP_010494.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:848795-851131:+ | gene-YDR208W_Sparadoxus | rna-NM_001180516.1_Sparadoxus | cds-NP_010494.1_Sparadoxus | 90.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |