Gene name: MSS2
Reference locus (S288C): YDL107W
Gene biotype: protein_coding
Description: Protein MSS2, mitochondrial; Peripherally bound inner membrane protein of the mitochondrial matrix; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p
Top 10 interactors (score): COX18 (0.958); PNT1 (0.953); MBA1 (0.89); COX20 (0.88); OXA1 (0.843); COX2 (0.781); PUF3 (0.763); PET111 (0.699); SCO1 (0.698); SCO2 (0.671); TIM21 (0.628); SOM1 (0.615); AFG3 (0.575); PET54 (0.572); COX19 (0.571); ARG8 (0.567); HOT13 (0.563); PET309 (0.56); COX10 (0.56); TIM12 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:253546-254601:+ | gene-YDL107W_AKU4011 | rna-NM_001180166.1_AKU4011 | cds-NP_010176.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:295349-296404:- | gene-YDL107W_BG1 | rna-NM_001180166.1_BG1 | cds-NP_010176.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:270958-272013:+ | gene-YDL107W_Bruggeman | rna-NM_001180166.1_Bruggeman | cds-NP_010176.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:267698-268753:+ | gene-YDL107W_CAT1 | rna-NM_001180166.1_CAT1 | cds-NP_010176.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:251806-252861:+ | gene-YDL107W_CBS1585 | rna-NM_001180166.1_CBS1585 | cds-NP_010176.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:268467-269522:+ | gene-YDL107W_CBS436 | rna-NM_001180166.1_CBS436 | cds-NP_010176.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:250232-251287:+ | gene-YDL107W_CBS6412 | rna-NM_001180166.1_CBS6412 | cds-NP_010176.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:269967-271022:+ | gene-YDL107W_CBS6413 | rna-NM_001180166.1_CBS6413 | cds-NP_010176.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:267694-268749:+ | gene-YDL107W_CENPK1137D | rna-NM_001180166.1_CENPK1137D | cds-NP_010176.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:264573-265628:+ | gene-YDL107W_EthanolRed | rna-NM_001180166.1_EthanolRed | cds-NP_010176.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:270543-271598:+ | gene-YDL107W_FaliES1 | rna-NM_001180166.1_FaliES1 | cds-NP_010176.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:40587-41642:+ | gene-YDL107W_JAY291 | rna-NM_001180166.1_JAY291 | cds-NP_010176.1_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:268745-269800:+ | gene-YDL107W_MUCL30387 | rna-NM_001180166.1_MUCL30387 | cds-NP_010176.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:259503-260558:+ | gene-YDL107W_MUCL30388 | rna-NM_001180166.1_MUCL30388 | cds-NP_010176.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:252912-253967:+ | gene-YDL107W_MUCL39482 | rna-NM_001180166.1_MUCL39482 | cds-NP_010176.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:174697-175752:+ | gene-YDL107W_MUCL42920 | rna-NM_001180166.1_MUCL42920 | cds-NP_010176.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:268844-269899:+ | gene-YDL107W_NCIM3186 | rna-NM_001180166.1_NCIM3186 | cds-NP_010176.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:252940-253995:+ | gene-YDL107W_NCYC1407 | rna-NM_001180166.1_NCYC1407 | cds-NP_010176.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:259698-260753:+ | gene-YDL107W_PE2H3 | rna-NM_001180166.1_PE2H3 | cds-NP_010176.1_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:259702-260757:+ | gene-YDL107W_PE2H4 | rna-NM_001180166.1_PE2H4 | cds-NP_010176.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:268921-269976:+ | gene-YDL107W_S288C | rna-NM_001180166.1_S288C | cds-NP_010176.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:164938-165993:- | gene-YDL107W_SA1 | rna-NM_001180166.1_SA1 | cds-NP_010176.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:270054-271109:+ | gene-YDL107W_ThermosaccDry | rna-NM_001180166.1_ThermosaccDry | cds-NP_010176.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:272160-273215:+ | gene-YDL107W_VR1 | rna-NM_001180166.1_VR1 | cds-NP_010176.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:267979-269034:+ | gene-YDL107W_ZTW1 | rna-NM_001180166.1_ZTW1 | cds-NP_010176.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:270130-271185:+ | gene-YDL107W_Sparadoxus | rna-NM_001180166.1_Sparadoxus | cds-NP_010176.1_Sparadoxus | 85.9 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |