Gene name: MSO1
Reference locus (S288C): YNR049C
Gene biotype: protein_coding
Description: Protein MSO1; Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress
Top 10 interactors (score): SSO1 (0.995); SEC9 (0.994); SNC1 (0.986); SEC1 (0.984); SNC2 (0.974); SSO2 (0.956); UFE1 (0.938); SPO20 (0.929); SEC4 (0.922); VPS45 (0.917); SFT1 (0.916); SED5 (0.915); GOS1 (0.912); NYV1 (0.908); VAM3 (0.906); BET1 (0.903); BOS1 (0.903); YKT6 (0.903); SEC15 (0.902); SEC22 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:237841-238473:+ | gene-YNR049C_AKU4011 | rna-NM_001183226.3_AKU4011 | cds-NP_014447.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:604562-605194:- | gene-YNR049C_BG1 | rna-NM_001183226.3_BG1 | cds-NP_014447.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:714343-714975:- | gene-YNR049C_Bruggeman | rna-NM_001183226.3_Bruggeman | cds-NP_014447.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:748314-748946:- | gene-YNR049C_CAT1 | rna-NM_001183226.3_CAT1 | cds-NP_014447.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:702564-703196:- | gene-YNR049C_CBS1585 | rna-NM_001183226.3_CBS1585 | cds-NP_014447.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:764107-764739:- | gene-YNR049C_CBS436 | rna-NM_001183226.3_CBS436 | cds-NP_014447.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:691542-692174:- | gene-YNR049C_CBS6412 | rna-NM_001183226.3_CBS6412 | cds-NP_014447.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:693227-693859:- | gene-YNR049C_CBS6413 | rna-NM_001183226.3_CBS6413 | cds-NP_014447.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:706767-707399:- | gene-YNR049C_CENPK1137D | rna-NM_001183226.3_CENPK1137D | cds-NP_014447.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:698206-698838:- | gene-YNR049C_EthanolRed | rna-NM_001183226.3_EthanolRed | cds-NP_014447.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:689409-690041:- | gene-YNR049C_FaliES1 | rna-NM_001183226.3_FaliES1 | cds-NP_014447.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:12601-13233:+ | gene-YNR049C_JAY291 | rna-NM_001183226.3_JAY291 | cds-NP_014447.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:712271-712903:- | gene-YNR049C_MUCL30387 | rna-NM_001183226.3_MUCL30387 | cds-NP_014447.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:753331-753963:- | gene-YNR049C_MUCL30388 | rna-NM_001183226.3_MUCL30388 | cds-NP_014447.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:694033-694665:- | gene-YNR049C_MUCL39482 | rna-NM_001183226.3_MUCL39482 | cds-NP_014447.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:698744-699376:- | gene-YNR049C_MUCL42920 | rna-NM_001183226.3_MUCL42920 | cds-NP_014447.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:712992-713624:- | gene-YNR049C_NCIM3186 | rna-NM_001183226.3_NCIM3186 | cds-NP_014447.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:696551-697183:- | gene-YNR049C_NCYC1407 | rna-NM_001183226.3_NCYC1407 | cds-NP_014447.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:697415-698047:- | gene-YNR049C_PE2H3 | rna-NM_001183226.3_PE2H3 | cds-NP_014447.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:698817-699449:- | gene-YNR049C_PE2H4 | rna-NM_001183226.3_PE2H4 | cds-NP_014447.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:713023-713655:- | gene-YNR049C_S288C | rna-NM_001183226.3_S288C | cds-NP_014447.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:12663-13295:+ | gene-YNR049C_SA1 | rna-NM_001183226.3_SA1 | cds-NP_014447.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:689746-690378:- | gene-YNR049C_ThermosaccDry | rna-NM_001183226.3_ThermosaccDry | cds-NP_014447.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:731874-732506:- | gene-YNR049C_VR1 | rna-NM_001183226.3_VR1 | cds-NP_014447.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:599521-600153:- | gene-YNR049C_ZTW1 | rna-NM_001183226.3_ZTW1 | cds-NP_014447.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:703969-704601:- | gene-YNR049C_Sparadoxus | rna-NM_001183226.3_Sparadoxus | cds-NP_014447.3_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |