Gene name: MSN2
Reference locus (S288C): YMR037C
Gene biotype: protein_coding
Description: Zinc finger protein MSN2; Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress
Top 10 interactors (score): RIM15 (0.994); HOG1 (0.993); MSN4 (0.989); TPK2 (0.982); TPK1 (0.977); TPK3 (0.977); SNF1 (0.958); SCH9 (0.955); WHI2 (0.953); HSF1 (0.951); YAP1 (0.938); MCM1 (0.934); SKN7 (0.919); YAK1 (0.915); RAS2 (0.911); SKO1 (0.893); GCN4 (0.887); HOT1 (0.887); SOK2 (0.883); TOR1 (0.875)
Homologues (species, bitscore): EGR1 (Homo sapiens, 77.8); Egr1 (Mus musculus, 77.4); egr1 (Danio rerio, 78.2); egr1 (Xenopus tropicalis, 77.4); sr (Drosophila melanogaster, 77.8); egrh-1 (Caenorhabditis elegans, 75.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:394003-396117:- | gene-YMR037C_AKU4011 | rna-NM_001182534.1_AKU4011 | cds-NP_013751.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:146736-148850:+ | gene-YMR037C_BG1 | rna-NM_001182534.1_BG1 | cds-NP_013751.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:333942-336056:- | gene-YMR037C_Bruggeman | rna-NM_001182534.1_Bruggeman | cds-NP_013751.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:336458-338572:- | gene-YMR037C_CAT1 | rna-NM_001182534.1_CAT1 | cds-NP_013751.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:326944-329058:- | gene-YMR037C_CBS1585 | rna-NM_001182534.1_CBS1585 | cds-NP_013751.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:332485-334599:- | gene-YMR037C_CBS436 | rna-NM_001182534.1_CBS436 | cds-NP_013751.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:440346-442460:- | gene-YMR037C_CBS6412 | rna-NM_001182534.1_CBS6412 | cds-NP_013751.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:326200-328314:- | gene-YMR037C_CBS6413 | rna-NM_001182534.1_CBS6413 | cds-NP_013751.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:339132-341246:- | gene-YMR037C_CENPK1137D | rna-NM_001182534.1_CENPK1137D | cds-NP_013751.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:326776-328890:- | gene-YMR037C_EthanolRed | rna-NM_001182534.1_EthanolRed | cds-NP_013751.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:329958-332072:- | gene-YMR037C_FaliES1 | rna-NM_001182534.1_FaliES1 | cds-NP_013751.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:104871-106985:+ | gene-YMR037C_JAY291 | rna-NM_001182534.1_JAY291 | cds-NP_013751.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:331901-334015:- | gene-YMR037C_MUCL30387 | rna-NM_001182534.1_MUCL30387 | cds-NP_013751.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:336321-338435:- | gene-YMR037C_MUCL30388 | rna-NM_001182534.1_MUCL30388 | cds-NP_013751.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:327227-329341:- | gene-YMR037C_MUCL39482 | rna-NM_001182534.1_MUCL39482 | cds-NP_013751.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:333046-335160:- | gene-YMR037C_MUCL42920 | rna-NM_001182534.1_MUCL42920 | cds-NP_013751.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:344357-346471:- | gene-YMR037C_NCIM3186 | rna-NM_001182534.1_NCIM3186 | cds-NP_013751.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:327144-329258:- | gene-YMR037C_NCYC1407 | rna-NM_001182534.1_NCYC1407 | cds-NP_013751.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:333087-335201:- | gene-YMR037C_PE2H3 | rna-NM_001182534.1_PE2H3 | cds-NP_013751.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:339182-341296:- | gene-YMR037C_PE2H4 | rna-NM_001182534.1_PE2H4 | cds-NP_013751.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:344403-346517:- | gene-YMR037C_S288C | rna-NM_001182534.1_S288C | cds-NP_013751.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:191743-193857:+ | gene-YMR037C_SA1 | rna-NM_001182534.1_SA1 | cds-NP_013751.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:327027-329141:- | gene-YMR037C_ThermosaccDry | rna-NM_001182534.1_ThermosaccDry | cds-NP_013751.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:331728-333842:- | gene-YMR037C_VR1 | rna-NM_001182534.1_VR1 | cds-NP_013751.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:306042-308156:- | gene-YMR037C_ZTW1 | rna-NM_001182534.1_ZTW1 | cds-NP_013751.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:339944-342061:- | gene-YMR037C_Sparadoxus | rna-NM_001182534.1_Sparadoxus | cds-NP_013751.1_Sparadoxus | 88.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |