Gene name: MSC6
Reference locus (S288C): YOR354C
Gene biotype: protein_coding
Description: Meiotic sister-chromatid recombination protein 6, mitochondrial; Multicopy suppressor of HER2 involved in mitochondrial translation; mutant is defective in directing meiotic recombination events to homologous chromatids
Top 10 interactors (score): ATP22 (0.812); PUF3 (0.763); AEP3 (0.76); PET111 (0.712); PET309 (0.711); RMD9 (0.71); SPO75 (0.696); MRX1 (0.679); SOV1 (0.676); CCM1 (0.673); RPM2 (0.613); IFM1 (0.602); OAR1 (0.569); THI22 (0.566); RCK1 (0.56); CSM4 (0.526); PET122 (0.523); MER1 (0.521); HEM15 (0.482); BIO3 (0.472)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:987729-989807:- | gene-YOR354C_AKU4011 | rna-NM_001183774.1_AKU4011 | cds-NP_014999.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000078.1:24911-26989:- | gene-YOR354C_BG1 | rna-NM_001183774.1_BG1 | cds-NP_014999.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:972547-974625:- | gene-YOR354C_Bruggeman | rna-NM_001183774.1_Bruggeman | cds-NP_014999.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:972371-974449:- | gene-YOR354C_CAT1 | rna-NM_001183774.1_CAT1 | cds-NP_014999.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:972139-974217:- | gene-YOR354C_CBS1585 | rna-NM_001183774.1_CBS1585 | cds-NP_014999.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:966953-969031:- | gene-YOR354C_CBS436 | rna-NM_001183774.1_CBS436 | cds-NP_014999.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:201439-203517:- | gene-YOR354C_CBS6412 | rna-NM_001183774.1_CBS6412 | cds-NP_014999.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:976412-978490:- | gene-YOR354C_CBS6413 | rna-NM_001183774.1_CBS6413 | cds-NP_014999.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:1000969-1003047:- | gene-YOR354C_CENPK1137D | rna-NM_001183774.1_CENPK1137D | cds-NP_014999.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:216433-218511:- | gene-YOR354C_EthanolRed | rna-NM_001183774.1_EthanolRed | cds-NP_014999.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:969262-971340:- | gene-YOR354C_FaliES1 | rna-NM_001183774.1_FaliES1 | cds-NP_014999.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:34326-36404:+ | gene-YOR354C_JAY291 | rna-NM_001183774.1_JAY291 | cds-NP_014999.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:981872-983950:- | gene-YOR354C_MUCL30387 | rna-NM_001183774.1_MUCL30387 | cds-NP_014999.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:989891-991969:- | gene-YOR354C_MUCL30388 | rna-NM_001183774.1_MUCL30388 | cds-NP_014999.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:978674-980752:- | gene-YOR354C_MUCL39482 | rna-NM_001183774.1_MUCL39482 | cds-NP_014999.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:986279-988357:- | gene-YOR354C_MUCL42920 | rna-NM_001183774.1_MUCL42920 | cds-NP_014999.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:1001036-1003114:- | gene-YOR354C_NCIM3186 | rna-NM_001183774.1_NCIM3186 | cds-NP_014999.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:979682-981760:- | gene-YOR354C_NCYC1407 | rna-NM_001183774.1_NCYC1407 | cds-NP_014999.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:974941-977019:- | gene-YOR354C_PE2H3 | rna-NM_001183774.1_PE2H3 | cds-NP_014999.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:991293-993371:- | gene-YOR354C_PE2H4 | rna-NM_001183774.1_PE2H4 | cds-NP_014999.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:1001147-1003225:- | gene-YOR354C_S288C | rna-NM_001183774.1_S288C | cds-NP_014999.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:105676-107754:- | gene-YOR354C_SA1 | rna-NM_001183774.1_SA1 | cds-NP_014999.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:968432-970510:- | gene-YOR354C_ThermosaccDry | rna-NM_001183774.1_ThermosaccDry | cds-NP_014999.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:1029693-1031771:- | gene-YOR354C_VR1 | rna-NM_001183774.1_VR1 | cds-NP_014999.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:701166-703244:- | gene-YOR354C_ZTW1 | rna-NM_001183774.1_ZTW1 | cds-NP_014999.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:974691-976769:- | gene-YOR354C_Sparadoxus | rna-NM_001183774.1_Sparadoxus | cds-NP_014999.1_Sparadoxus | 87.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |