Gene name: MSB1
Reference locus (S288C): YOR188W
Gene biotype: protein_coding
Description: Morphogenesis-related protein MSB1; Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress
Top 10 interactors (score): BEM1 (0.952); CDC42 (0.919); CDC24 (0.88); BEM2 (0.871); BOI2 (0.868); GIC1 (0.776); BEM4 (0.775); GIC2 (0.773); MSB2 (0.713); CLA4 (0.662); BOI1 (0.64); MSB3 (0.616); BUD6 (0.596); PMD1 (0.595); BNI1 (0.591); RHO1 (0.588); RGD2 (0.573); CSI2 (0.571); WHI4 (0.571); RSR1 (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:683094-686507:+ | gene-YOR188W_AKU4011 | rna-NM_001183607.3_AKU4011 | cds-NP_014831.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:85145-88558:+ | gene-YOR188W_BG1 | rna-NM_001183607.3_BG1 | cds-NP_014831.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:667101-670514:+ | gene-YOR188W_Bruggeman | rna-NM_001183607.3_Bruggeman | cds-NP_014831.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:668275-671688:+ | gene-YOR188W_CAT1 | rna-NM_001183607.3_CAT1 | cds-NP_014831.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:666083-669496:+ | gene-YOR188W_CBS1585 | rna-NM_001183607.3_CBS1585 | cds-NP_014831.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:664195-667608:+ | gene-YOR188W_CBS436 | rna-NM_001183607.3_CBS436 | cds-NP_014831.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:663199-666612:+ | gene-YOR188W_CBS6412 | rna-NM_001183607.3_CBS6412 | cds-NP_014831.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:671840-675253:+ | gene-YOR188W_CBS6413 | rna-NM_001183607.3_CBS6413 | cds-NP_014831.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:685517-688930:+ | gene-YOR188W_CENPK1137D | rna-NM_001183607.3_CENPK1137D | cds-NP_014831.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:659063-662476:+ | gene-YOR188W_EthanolRed | rna-NM_001183607.3_EthanolRed | cds-NP_014831.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:664136-667549:+ | gene-YOR188W_FaliES1 | rna-NM_001183607.3_FaliES1 | cds-NP_014831.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000038.1:9986-13399:- | gene-YOR188W_JAY291 | rna-NM_001183607.3_JAY291 | cds-NP_014831.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:671905-675318:+ | gene-YOR188W_MUCL30387 | rna-NM_001183607.3_MUCL30387 | cds-NP_014831.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:679320-682733:+ | gene-YOR188W_MUCL30388 | rna-NM_001183607.3_MUCL30388 | cds-NP_014831.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:673413-676826:+ | gene-YOR188W_MUCL39482 | rna-NM_001183607.3_MUCL39482 | cds-NP_014831.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:682793-686206:+ | gene-YOR188W_MUCL42920 | rna-NM_001183607.3_MUCL42920 | cds-NP_014831.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:685656-689069:+ | gene-YOR188W_NCIM3186 | rna-NM_001183607.3_NCIM3186 | cds-NP_014831.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:673510-676923:+ | gene-YOR188W_NCYC1407 | rna-NM_001183607.3_NCYC1407 | cds-NP_014831.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:672332-675745:+ | gene-YOR188W_PE2H3 | rna-NM_001183607.3_PE2H3 | cds-NP_014831.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:682709-686122:+ | gene-YOR188W_PE2H4 | rna-NM_001183607.3_PE2H4 | cds-NP_014831.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:685767-689180:+ | gene-YOR188W_S288C | rna-NM_001183607.3_S288C | cds-NP_014831.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:102325-105738:+ | gene-YOR188W_SA1 | rna-NM_001183607.3_SA1 | cds-NP_014831.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:663320-666733:+ | gene-YOR188W_ThermosaccDry | rna-NM_001183607.3_ThermosaccDry | cds-NP_014831.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:727358-730771:+ | gene-YOR188W_VR1 | rna-NM_001183607.3_VR1 | cds-NP_014831.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:396722-400135:+ | gene-YOR188W_ZTW1 | rna-NM_001183607.3_ZTW1 | cds-NP_014831.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:668926-672366:+ | gene-YOR188W_Sparadoxus | rna-NM_001183607.3_Sparadoxus | cds-NP_014831.3_Sparadoxus | 87.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |