Gene name: MSA1
Reference locus (S288C): YOR066W
Gene biotype: protein_coding
Description: Activator of G1-specific transcription factors MBF and SBF; involved in regulation of the timing of G1-specific gene transcription and cell cycle initiation; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; MSA1 has a paralog, MSA2, that arose from the whole genome duplication
Top 10 interactors (score): MSA2 (0.926); SWI4 (0.917); CDC28 (0.839); WHI5 (0.813); MBP1 (0.808); SWI6 (0.78); STE12 (0.763); MAD2 (0.752); NRM1 (0.748); SRL3 (0.746); STB1 (0.746); TEC1 (0.744); YEL074W (0.651); CLN3 (0.611); HOG1 (0.561); CDC7 (0.498); SLD2 (0.469); SMC1 (0.467); YNL208W (0.452); CSI2 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:433770-435659:+ | gene-YOR066W_AKU4011 | rna-NM_001183485.1_AKU4011 | cds-NP_014709.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:144042-145931:- | gene-YOR066W_BG1 | rna-NM_001183485.1_BG1 | cds-NP_014709.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:436484-438373:+ | gene-YOR066W_Bruggeman | rna-NM_001183485.1_Bruggeman | cds-NP_014709.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:435240-437129:+ | gene-YOR066W_CAT1 | rna-NM_001183485.1_CAT1 | cds-NP_014709.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:428490-430379:+ | gene-YOR066W_CBS1585 | rna-NM_001183485.1_CBS1585 | cds-NP_014709.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:432768-434657:+ | gene-YOR066W_CBS436 | rna-NM_001183485.1_CBS436 | cds-NP_014709.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:427780-429669:+ | gene-YOR066W_CBS6412 | rna-NM_001183485.1_CBS6412 | cds-NP_014709.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:435097-436986:+ | gene-YOR066W_CBS6413 | rna-NM_001183485.1_CBS6413 | cds-NP_014709.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:449418-451307:+ | gene-YOR066W_CENPK1137D | rna-NM_001183485.1_CENPK1137D | cds-NP_014709.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:430482-432371:+ | gene-YOR066W_EthanolRed | rna-NM_001183485.1_EthanolRed | cds-NP_014709.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:433811-435700:+ | gene-YOR066W_FaliES1 | rna-NM_001183485.1_FaliES1 | cds-NP_014709.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000407.1:8657-10546:- | gene-YOR066W_JAY291 | rna-NM_001183485.1_JAY291 | cds-NP_014709.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:441266-443155:+ | gene-YOR066W_MUCL30387 | rna-NM_001183485.1_MUCL30387 | cds-NP_014709.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:445676-447565:+ | gene-YOR066W_MUCL30388 | rna-NM_001183485.1_MUCL30388 | cds-NP_014709.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:435958-437847:+ | gene-YOR066W_MUCL39482 | rna-NM_001183485.1_MUCL39482 | cds-NP_014709.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:451089-452978:+ | gene-YOR066W_MUCL42920 | rna-NM_001183485.1_MUCL42920 | cds-NP_014709.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:449325-451214:+ | gene-YOR066W_NCIM3186 | rna-NM_001183485.1_NCIM3186 | cds-NP_014709.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:442876-444765:+ | gene-YOR066W_NCYC1407 | rna-NM_001183485.1_NCYC1407 | cds-NP_014709.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:441469-443358:+ | gene-YOR066W_PE2H3 | rna-NM_001183485.1_PE2H3 | cds-NP_014709.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:451850-453739:+ | gene-YOR066W_PE2H4 | rna-NM_001183485.1_PE2H4 | cds-NP_014709.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:449436-451325:+ | gene-YOR066W_S288C | rna-NM_001183485.1_S288C | cds-NP_014709.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000091.1:36321-38210:- | gene-YOR066W_SA1 | rna-NM_001183485.1_SA1 | cds-NP_014709.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:432967-434856:+ | gene-YOR066W_ThermosaccDry | rna-NM_001183485.1_ThermosaccDry | cds-NP_014709.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:434206-436095:+ | gene-YOR066W_VR1 | rna-NM_001183485.1_VR1 | cds-NP_014709.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:166968-168856:+ | gene-YOR066W_ZTW1 | rna-NM_001183485.1_ZTW1 | cds-NP_014709.1_ZTW1 | 99.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:438528-440414:+ | gene-YOR066W_Sparadoxus | rna-NM_001183485.1_Sparadoxus | cds-NP_014709.1_Sparadoxus | 87.6 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |