MRX9 (YDL027C)


Gene profile

Gene name: MRX9
Reference locus (S288C): YDL027C
Gene biotype: protein_coding

Description: MIOREX complex component 9; Protein that associates with mitochondrial ribosome; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDL027C is not an essential gene

Top 10 interactors (score): YDR286C (0.9); MPM1 (0.784); AIM34 (0.747); AIP1 (0.717); YDL242W (0.716); UBX3 (0.607); RVS167 (0.593); MRP49 (0.571); AIM24 (0.562); QRI5 (0.555); RMD9 (0.525); GUF1 (0.524); ATP25 (0.487); COA1 (0.485); AIM21 (0.483); AIM23 (0.452); MAM33 (0.45); PUF3 (0.401)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:389770-391032:- gene-YDL027C_AKU4011 rna-NM_001180086.1_AKU4011 cds-NP_010257.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:158835-160097:+ gene-YDL027C_BG1 rna-NM_001180086.1_BG1 cds-NP_010257.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:408436-409698:- gene-YDL027C_Bruggeman rna-NM_001180086.1_Bruggeman cds-NP_010257.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:402980-404242:- gene-YDL027C_CAT1 rna-NM_001180086.1_CAT1 cds-NP_010257.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:386185-387447:- gene-YDL027C_CBS1585 rna-NM_001180086.1_CBS1585 cds-NP_010257.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:403719-404981:- gene-YDL027C_CBS436 rna-NM_001180086.1_CBS436 cds-NP_010257.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:383980-385242:- gene-YDL027C_CBS6412 rna-NM_001180086.1_CBS6412 cds-NP_010257.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:405947-407209:- gene-YDL027C_CBS6413 rna-NM_001180086.1_CBS6413 cds-NP_010257.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:402555-403817:- gene-YDL027C_CENPK1137D rna-NM_001180086.1_CENPK1137D cds-NP_010257.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:398600-399862:- gene-YDL027C_EthanolRed rna-NM_001180086.1_EthanolRed cds-NP_010257.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:404792-406054:- gene-YDL027C_FaliES1 rna-NM_001180086.1_FaliES1 cds-NP_010257.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000370.1:19337-20599:- gene-YDL027C_JAY291 rna-NM_001180086.1_JAY291 cds-NP_010257.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:404167-405429:- gene-YDL027C_MUCL30387 rna-NM_001180086.1_MUCL30387 cds-NP_010257.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:394681-395943:- gene-YDL027C_MUCL30388 rna-NM_001180086.1_MUCL30388 cds-NP_010257.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:387363-388625:- gene-YDL027C_MUCL39482 rna-NM_001180086.1_MUCL39482 cds-NP_010257.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:309727-310989:- gene-YDL027C_MUCL42920 rna-NM_001180086.1_MUCL42920 cds-NP_010257.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:403618-404880:- gene-YDL027C_NCIM3186 rna-NM_001180086.1_NCIM3186 cds-NP_010257.1_NCIM3186 98.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:387279-388541:- gene-YDL027C_NCYC1407 rna-NM_001180086.1_NCYC1407 cds-NP_010257.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:394819-396081:- gene-YDL027C_PE2H3 rna-NM_001180086.1_PE2H3 cds-NP_010257.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:394177-395439:- gene-YDL027C_PE2H4 rna-NM_001180086.1_PE2H4 cds-NP_010257.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:403695-404957:- gene-YDL027C_S288C rna-NM_001180086.1_S288C cds-NP_010257.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:29980-31242:+ gene-YDL027C_SA1 rna-NM_001180086.1_SA1 cds-NP_010257.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:404252-405514:- gene-YDL027C_ThermosaccDry rna-NM_001180086.1_ThermosaccDry cds-NP_010257.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:407314-408576:- gene-YDL027C_VR1 rna-NM_001180086.1_VR1 cds-NP_010257.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:402152-403414:- gene-YDL027C_ZTW1 rna-NM_001180086.1_ZTW1 cds-NP_010257.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:406387-407636:- gene-YDL027C_Sparadoxus rna-NM_001180086.1_Sparadoxus cds-NP_010257.1_Sparadoxus 85.6 98.9 Verified 1 1 0 False False False True False

Additional files