Gene name: MRS1
Reference locus (S288C): YIR021W
Gene biotype: protein_coding
Description: Splicing protein; required for splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA; MRS1 has a paralog, CCE1, that arose from the whole genome duplication
Top 10 interactors (score): AI5_BETA (0.941); BI3 (0.939); MSS18 (0.886); SUV3 (0.866); PUF3 (0.81); PET54 (0.78); COX1 (0.765); MSS116 (0.75); AEP2 (0.749); CBP2 (0.711); MSY1 (0.705); BI4 (0.698); PIP2 (0.697); AIM22 (0.695); MNE1 (0.678); OAF1 (0.67); AI1 (0.655); MRPS35 (0.653); BI2 (0.612); YJR115W (0.574)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:395490-396581:+ | gene-YIR021W_AKU4011 | rna-NM_001179543.3_AKU4011 | cds-NP_012287.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:30281-31372:- | gene-YIR021W_BG1 | rna-NM_001179543.3_BG1 | cds-NP_012287.3_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:401368-402459:+ | gene-YIR021W_Bruggeman | rna-NM_001179543.3_Bruggeman | cds-NP_012287.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:386658-387749:+ | gene-YIR021W_CAT1 | rna-NM_001179543.3_CAT1 | cds-NP_012287.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:396471-397562:+ | gene-YIR021W_CBS1585 | rna-NM_001179543.3_CBS1585 | cds-NP_012287.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:388473-389564:+ | gene-YIR021W_CBS436 | rna-NM_001179543.3_CBS436 | cds-NP_012287.3_CBS436 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:94976-96067:+ | gene-YIR021W_CBS6412 | rna-NM_001179543.3_CBS6412 | cds-NP_012287.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:387572-388663:+ | gene-YIR021W_CBS6413 | rna-NM_001179543.3_CBS6413 | cds-NP_012287.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:388955-390046:+ | gene-YIR021W_CENPK1137D | rna-NM_001179543.3_CENPK1137D | cds-NP_012287.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:378435-379526:+ | gene-YIR021W_EthanolRed | rna-NM_001179543.3_EthanolRed | cds-NP_012287.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:398263-399354:+ | gene-YIR021W_FaliES1 | rna-NM_001179543.3_FaliES1 | cds-NP_012287.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:34793-35884:- | gene-YIR021W_JAY291 | rna-NM_001179543.3_JAY291 | cds-NP_012287.3_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:402490-403581:+ | gene-YIR021W_MUCL30387 | rna-NM_001179543.3_MUCL30387 | cds-NP_012287.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:397111-398202:+ | gene-YIR021W_MUCL30388 | rna-NM_001179543.3_MUCL30388 | cds-NP_012287.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:396617-397708:+ | gene-YIR021W_MUCL39482 | rna-NM_001179543.3_MUCL39482 | cds-NP_012287.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:402955-404046:+ | gene-YIR021W_MUCL42920 | rna-NM_001179543.3_MUCL42920 | cds-NP_012287.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:397294-398385:+ | gene-YIR021W_NCIM3186 | rna-NM_001179543.3_NCIM3186 | cds-NP_012287.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:400381-401472:+ | gene-YIR021W_NCYC1407 | rna-NM_001179543.3_NCYC1407 | cds-NP_012287.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:391248-392339:+ | gene-YIR021W_PE2H3 | rna-NM_001179543.3_PE2H3 | cds-NP_012287.3_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:385954-387045:+ | gene-YIR021W_PE2H4 | rna-NM_001179543.3_PE2H4 | cds-NP_012287.3_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:397294-398385:+ | gene-YIR021W_S288C | rna-NM_001179543.3_S288C | cds-NP_012287.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:30457-31548:- | gene-YIR021W_SA1 | rna-NM_001179543.3_SA1 | cds-NP_012287.3_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:395128-396219:+ | gene-YIR021W_ThermosaccDry | rna-NM_001179543.3_ThermosaccDry | cds-NP_012287.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:392481-393572:+ | gene-YIR021W_VR1 | rna-NM_001179543.3_VR1 | cds-NP_012287.3_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:4306-5397:+ | gene-YIR021W_ZTW1 | rna-NM_001179543.3_ZTW1 | cds-NP_012287.3_ZTW1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:392815-393906:+ | gene-YIR021W_Sparadoxus | rna-NM_001179543.3_Sparadoxus | cds-NP_012287.3_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |