Gene name: MRPS28
Reference locus (S288C): YDR337W
Gene biotype: protein_coding
Description: Mitochondrial 37s ribosomal protein mrps28; Mitochondrial ribosomal protein of the small subunit
Top 10 interactors (score): MRPL24 (0.999); MRPS12 (0.999); IMG1 (0.999); MRPS5 (0.999); RSM10 (0.999); MRPL4 (0.999); MRPS9 (0.999); MRP17 (0.999); RSM7 (0.999); RSM23 (0.999); MRPS16 (0.999); RSM27 (0.999); YML6 (0.999); MRPL32 (0.999); MRPL23 (0.999); MRPL39 (0.999); RSM19 (0.999); MRP10 (0.999); MRPL9 (0.999); MRPL28 (0.999)
Homologues (species, bitscore): MRPS15 (Homo sapiens, 51.6); Mrps15 (Mus musculus, 63.2); mrps15 (Danio rerio, 51.2); mrps15 (Xenopus tropicalis, 55.1); AT1G80620 (Arabidopsis thaliana, 59.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1092355-1093215:+ | gene-YDR337W_AKU4011 | rna-NM_001180645.3_AKU4011 | cds-NP_010624.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:38345-39205:- | gene-YDR337W_BG1 | rna-NM_001180645.3_BG1 | cds-NP_010624.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1119903-1120763:+ | gene-YDR337W_Bruggeman | rna-NM_001180645.3_Bruggeman | cds-NP_010624.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1106645-1107505:+ | gene-YDR337W_CAT1 | rna-NM_001180645.3_CAT1 | cds-NP_010624.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1086799-1087659:+ | gene-YDR337W_CBS1585 | rna-NM_001180645.3_CBS1585 | cds-NP_010624.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1105186-1106046:+ | gene-YDR337W_CBS436 | rna-NM_001180645.3_CBS436 | cds-NP_010624.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1083487-1084347:+ | gene-YDR337W_CBS6412 | rna-NM_001180645.3_CBS6412 | cds-NP_010624.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1104718-1105578:+ | gene-YDR337W_CBS6413 | rna-NM_001180645.3_CBS6413 | cds-NP_010624.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1144970-1145830:+ | gene-YDR337W_CENPK1137D | rna-NM_001180645.3_CENPK1137D | cds-NP_010624.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:267895-268755:+ | gene-YDR337W_EthanolRed | rna-NM_001180645.3_EthanolRed | cds-NP_010624.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1099110-1099970:+ | gene-YDR337W_FaliES1 | rna-NM_001180645.3_FaliES1 | cds-NP_010624.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000386.1:51623-52483:+ | gene-YDR337W_JAY291 | rna-NM_001180645.3_JAY291 | cds-NP_010624.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1105147-1106007:+ | gene-YDR337W_MUCL30387 | rna-NM_001180645.3_MUCL30387 | cds-NP_010624.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1094104-1094964:+ | gene-YDR337W_MUCL30388 | rna-NM_001180645.3_MUCL30388 | cds-NP_010624.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1078606-1079466:+ | gene-YDR337W_MUCL39482 | rna-NM_001180645.3_MUCL39482 | cds-NP_010624.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1025680-1026540:+ | gene-YDR337W_MUCL42920 | rna-NM_001180645.3_MUCL42920 | cds-NP_010624.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1146242-1147102:+ | gene-YDR337W_NCIM3186 | rna-NM_001180645.3_NCIM3186 | cds-NP_010624.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1091897-1092757:+ | gene-YDR337W_NCYC1407 | rna-NM_001180645.3_NCYC1407 | cds-NP_010624.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1102903-1103763:+ | gene-YDR337W_PE2H3 | rna-NM_001180645.3_PE2H3 | cds-NP_010624.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1108488-1109348:+ | gene-YDR337W_PE2H4 | rna-NM_001180645.3_PE2H4 | cds-NP_010624.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1146319-1147179:+ | gene-YDR337W_S288C | rna-NM_001180645.3_S288C | cds-NP_010624.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:117125-117985:+ | gene-YDR337W_SA1 | rna-NM_001180645.3_SA1 | cds-NP_010624.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1103383-1104243:+ | gene-YDR337W_ThermosaccDry | rna-NM_001180645.3_ThermosaccDry | cds-NP_010624.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1119296-1120156:+ | gene-YDR337W_VR1 | rna-NM_001180645.3_VR1 | cds-NP_010624.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:147494-148354:+ | gene-YDR337W_ZTW1 | rna-NM_001180645.3_ZTW1 | cds-NP_010624.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1098816-1099676:+ | gene-YDR337W_Sparadoxus | rna-NM_001180645.3_Sparadoxus | cds-NP_010624.3_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |