Gene name: MRPS12
Reference locus (S288C): YNR036C
Gene biotype: protein_coding
Description: 37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family
Top 10 interactors (score): RTC6 (0.999); IMG1 (0.999); RML2 (0.999); MRPL8 (0.999); MRP4 (0.999); RSM7 (0.999); MRP17 (0.999); MRPS9 (0.999); MRPS16 (0.999); RSM23 (0.999); RSM19 (0.999); MRPL16 (0.999); MRPS28 (0.999); RSM18 (0.999); MRPS5 (0.999); MRP2 (0.999); RSM24 (0.999); MRP20 (0.998); RSM10 (0.998); MRPL22 (0.998)
Homologues (species, bitscore): MRPS12 (Homo sapiens, 110.5); Mrps12 (Mus musculus, 107.5); si:dkey-17e16.10 (Danio rerio, 121.7); mrps12 (Xenopus tropicalis, 119.8); tko (Drosophila melanogaster, 103.6); mrps-12 (Caenorhabditis elegans, 83.2); RPS12A (Arabidopsis thaliana, 134.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:677997-678458:- | gene-YNR036C_AKU4011 | rna-NM_001183213.1_AKU4011 | cds-NP_014434.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:585921-586382:- | gene-YNR036C_BG1 | rna-NM_001183213.1_BG1 | cds-NP_014434.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:695457-695918:- | gene-YNR036C_Bruggeman | rna-NM_001183213.1_Bruggeman | cds-NP_014434.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:729712-730173:- | gene-YNR036C_CAT1 | rna-NM_001183213.1_CAT1 | cds-NP_014434.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:683751-684212:- | gene-YNR036C_CBS1585 | rna-NM_001183213.1_CBS1585 | cds-NP_014434.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:745423-745884:- | gene-YNR036C_CBS436 | rna-NM_001183213.1_CBS436 | cds-NP_014434.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:672937-673398:- | gene-YNR036C_CBS6412 | rna-NM_001183213.1_CBS6412 | cds-NP_014434.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:674643-675104:- | gene-YNR036C_CBS6413 | rna-NM_001183213.1_CBS6413 | cds-NP_014434.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:688110-688571:- | gene-YNR036C_CENPK1137D | rna-NM_001183213.1_CENPK1137D | cds-NP_014434.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:679674-680135:- | gene-YNR036C_EthanolRed | rna-NM_001183213.1_EthanolRed | cds-NP_014434.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:670877-671338:- | gene-YNR036C_FaliES1 | rna-NM_001183213.1_FaliES1 | cds-NP_014434.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:31419-31880:+ | gene-YNR036C_JAY291 | rna-NM_001183213.1_JAY291 | cds-NP_014434.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:693216-693677:- | gene-YNR036C_MUCL30387 | rna-NM_001183213.1_MUCL30387 | cds-NP_014434.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:734035-734496:- | gene-YNR036C_MUCL30388 | rna-NM_001183213.1_MUCL30388 | cds-NP_014434.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:675249-675710:- | gene-YNR036C_MUCL39482 | rna-NM_001183213.1_MUCL39482 | cds-NP_014434.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:679420-679881:- | gene-YNR036C_MUCL42920 | rna-NM_001183213.1_MUCL42920 | cds-NP_014434.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:694330-694791:- | gene-YNR036C_NCIM3186 | rna-NM_001183213.1_NCIM3186 | cds-NP_014434.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:677757-678218:- | gene-YNR036C_NCYC1407 | rna-NM_001183213.1_NCYC1407 | cds-NP_014434.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:678857-679318:- | gene-YNR036C_PE2H3 | rna-NM_001183213.1_PE2H3 | cds-NP_014434.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:680175-680636:- | gene-YNR036C_PE2H4 | rna-NM_001183213.1_PE2H4 | cds-NP_014434.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:694361-694822:- | gene-YNR036C_S288C | rna-NM_001183213.1_S288C | cds-NP_014434.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:31567-32028:+ | gene-YNR036C_SA1 | rna-NM_001183213.1_SA1 | cds-NP_014434.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:671214-671675:- | gene-YNR036C_ThermosaccDry | rna-NM_001183213.1_ThermosaccDry | cds-NP_014434.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:713233-713694:- | gene-YNR036C_VR1 | rna-NM_001183213.1_VR1 | cds-NP_014434.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:580626-581087:- | gene-YNR036C_ZTW1 | rna-NM_001183213.1_ZTW1 | cds-NP_014434.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:685294-685755:- | gene-YNR036C_Sparadoxus | rna-NM_001183213.1_Sparadoxus | cds-NP_014434.1_Sparadoxus | 93.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |